Protein–RNA interactions for Protein: P05090

APOD, Apolipoprotein D, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APODP05090 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APODP05090 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.69■□□□□ 0.58
APODP05090 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.69■□□□□ 0.58
APODP05090 AL160237.2-201ENST00000556165 472 ntBASIC18.69■□□□□ 0.58
APODP05090 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.69■□□□□ 0.58
APODP05090 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.69■□□□□ 0.58
APODP05090 AC008687.5-201ENST00000593746 558 ntBASIC18.69■□□□□ 0.58
APODP05090 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
APODP05090 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.69■□□□□ 0.58
APODP05090 AC004263.2-201ENST00000617183 678 ntBASIC18.69■□□□□ 0.58
APODP05090 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.69■□□□□ 0.58
APODP05090 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
APODP05090 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.69■□□□□ 0.58
APODP05090 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APODP05090 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.69■□□□□ 0.58
APODP05090 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
APODP05090 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.69■□□□□ 0.58
APODP05090 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APODP05090 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.69■□□□□ 0.58
APODP05090 NSUN5P1-202ENST00000421140 1535 ntBASIC18.69■□□□□ 0.58
APODP05090 NSUN5P2-203ENST00000457352 1529 ntBASIC18.69■□□□□ 0.58
APODP05090 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
APODP05090 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APODP05090 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APODP05090 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APODP05090 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.68■□□□□ 0.58
APODP05090 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
APODP05090 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
APODP05090 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
APODP05090 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
APODP05090 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
APODP05090 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.68■□□□□ 0.58
APODP05090 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.68■□□□□ 0.58
APODP05090 AC079781.3-201ENST00000449110 356 ntBASIC18.68■□□□□ 0.58
APODP05090 MINOS1P3-201ENST00000457048 203 ntBASIC18.68■□□□□ 0.58
APODP05090 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.68■□□□□ 0.58
APODP05090 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APODP05090 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APODP05090 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APODP05090 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.68■□□□□ 0.58
APODP05090 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.68■□□□□ 0.58
APODP05090 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.68■□□□□ 0.58
APODP05090 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.68■□□□□ 0.58
APODP05090 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APODP05090 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.68■□□□□ 0.58
APODP05090 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APODP05090 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APODP05090 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APODP05090 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APODP05090 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.68■□□□□ 0.58
APODP05090 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APODP05090 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
APODP05090 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APODP05090 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APODP05090 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APODP05090 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
APODP05090 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APODP05090 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APODP05090 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.67■□□□□ 0.58
APODP05090 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
APODP05090 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APODP05090 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.67■□□□□ 0.58
APODP05090 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
APODP05090 AL161938.1-201ENST00000569833 2180 ntBASIC18.67■□□□□ 0.58
APODP05090 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.67■□□□□ 0.58
APODP05090 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APODP05090 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
APODP05090 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APODP05090 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APODP05090 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.67■□□□□ 0.58
APODP05090 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
APODP05090 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.67■□□□□ 0.58
APODP05090 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.67■□□□□ 0.58
APODP05090 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.67■□□□□ 0.58
APODP05090 AC009078.2-202ENST00000463353 338 ntBASIC18.67■□□□□ 0.58
APODP05090 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.67■□□□□ 0.58
APODP05090 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.67■□□□□ 0.58
APODP05090 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.67■□□□□ 0.58
APODP05090 AC104692.2-201ENST00000603054 253 ntBASIC18.67■□□□□ 0.58
APODP05090 AL353801.3-201ENST00000609898 542 ntBASIC18.67■□□□□ 0.58
APODP05090 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APODP05090 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
APODP05090 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APODP05090 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
APODP05090 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
APODP05090 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.67■□□□□ 0.58
APODP05090 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APODP05090 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APODP05090 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APODP05090 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APODP05090 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APODP05090 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.66■□□□□ 0.58
APODP05090 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APODP05090 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.66■□□□□ 0.58
APODP05090 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APODP05090 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APODP05090 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
APODP05090 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
APODP05090 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
APODP05090 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms