Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.07■□□□□ 0.8
CHRNA1P02708 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CHRNA1P02708 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.07■□□□□ 0.8
CHRNA1P02708 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.07■□□□□ 0.8
CHRNA1P02708 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CHRNA1P02708 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.07■□□□□ 0.8
CHRNA1P02708 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA1P02708 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA1P02708 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.07■□□□□ 0.8
CHRNA1P02708 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.07■□□□□ 0.8
CHRNA1P02708 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA1P02708 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA1P02708 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA1P02708 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA1P02708 SAPCD2P3-201ENST00000455031 850 ntBASIC20.07■□□□□ 0.8
CHRNA1P02708 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.07■□□□□ 0.8
CHRNA1P02708 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.07■□□□□ 0.8
CHRNA1P02708 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.07■□□□□ 0.8
CHRNA1P02708 BNIP3P18-201ENST00000593976 575 ntBASIC20.07■□□□□ 0.8
CHRNA1P02708 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA1P02708 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA1P02708 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA1P02708 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA1P02708 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.07■□□□□ 0.8
CHRNA1P02708 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA1P02708 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA1P02708 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CHRNA1P02708 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA1P02708 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA1P02708 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA1P02708 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA1P02708 HLA-A-201ENST00000376802 1334 ntBASIC20.06■□□□□ 0.8
CHRNA1P02708 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA1P02708 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA1P02708 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA1P02708 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA1P02708 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CHRNA1P02708 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA1P02708 AL022342.1-201ENST00000400363 863 ntBASIC20.06■□□□□ 0.8
CHRNA1P02708 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CHRNA1P02708 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA1P02708 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.06■□□□□ 0.8
CHRNA1P02708 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.06■□□□□ 0.8
CHRNA1P02708 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.06■□□□□ 0.8
CHRNA1P02708 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.06■□□□□ 0.8
CHRNA1P02708 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.06■□□□□ 0.8
CHRNA1P02708 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.06■□□□□ 0.8
CHRNA1P02708 AL662844.1-201ENST00000546340 181 ntBASIC20.06■□□□□ 0.8
CHRNA1P02708 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CHRNA1P02708 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA1P02708 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA1P02708 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA1P02708 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA1P02708 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.05■□□□□ 0.8
CHRNA1P02708 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CHRNA1P02708 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA1P02708 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA1P02708 AC009102.3-201ENST00000623118 1491 ntBASIC20.05■□□□□ 0.8
CHRNA1P02708 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA1P02708 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.05■□□□□ 0.8
CHRNA1P02708 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA1P02708 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA1P02708 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA1P02708 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.05■□□□□ 0.8
CHRNA1P02708 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA1P02708 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA1P02708 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA1P02708 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA1P02708 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA1P02708 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA1P02708 POM121L3P-201ENST00000419331 1163 ntBASIC20.05■□□□□ 0.8
CHRNA1P02708 TSPY12P-201ENST00000421279 868 ntBASIC20.05■□□□□ 0.8
CHRNA1P02708 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA1P02708 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.05■□□□□ 0.8
CHRNA1P02708 AC079776.4-201ENST00000511039 504 ntBASIC20.05■□□□□ 0.8
CHRNA1P02708 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.05■□□□□ 0.8
CHRNA1P02708 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CHRNA1P02708 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
CHRNA1P02708 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.05■□□□□ 0.8
CHRNA1P02708 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA1P02708 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.05■□□□□ 0.8
CHRNA1P02708 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA1P02708 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA1P02708 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
CHRNA1P02708 SDHAP2-201ENST00000455183 2001 ntBASIC20.05■□□□□ 0.8
CHRNA1P02708 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.05■□□□□ 0.8
CHRNA1P02708 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CHRNA1P02708 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRNA1P02708 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRNA1P02708 AC005332.7-201ENST00000614046 2005 ntBASIC20.04■□□□□ 0.8
CHRNA1P02708 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRNA1P02708 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.04■□□□□ 0.8
CHRNA1P02708 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHRNA1P02708 AC113404.2-201ENST00000507884 177 ntBASIC20.04■□□□□ 0.8
CHRNA1P02708 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.04■□□□□ 0.8
CHRNA1P02708 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CHRNA1P02708 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.04■□□□□ 0.8
CHRNA1P02708 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
CHRNA1P02708 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CHRNA1P02708 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms