Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DRAP01903 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DRAP01903 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DRAP01903 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DRAP01903 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.87■□□□□ 0.77
HLA-DRAP01903 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DRAP01903 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DRAP01903 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DRAP01903 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DRAP01903 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DRAP01903 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DRAP01903 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DRAP01903 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DRAP01903 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.87■□□□□ 0.77
HLA-DRAP01903 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DRAP01903 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.87■□□□□ 0.77
HLA-DRAP01903 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DRAP01903 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DRAP01903 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DRAP01903 MIR3180-4-201ENST00000582223 153 ntBASIC19.87■□□□□ 0.77
HLA-DRAP01903 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DRAP01903 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.87■□□□□ 0.77
HLA-DRAP01903 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DRAP01903 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HLA-DRAP01903 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DRAP01903 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DRAP01903 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DRAP01903 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DRAP01903 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DRAP01903 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DRAP01903 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRAP01903 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HLA-DRAP01903 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRAP01903 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRAP01903 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRAP01903 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRAP01903 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HLA-DRAP01903 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRAP01903 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HLA-DRAP01903 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRAP01903 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRAP01903 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRAP01903 MIR149-201ENST00000384879 89 ntBASIC19.86■□□□□ 0.77
HLA-DRAP01903 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HLA-DRAP01903 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRAP01903 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DRAP01903 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DRAP01903 AC104076.2-201ENST00000448912 469 ntBASIC19.86■□□□□ 0.77
HLA-DRAP01903 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRAP01903 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRAP01903 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.86■□□□□ 0.77
HLA-DRAP01903 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.86■□□□□ 0.77
HLA-DRAP01903 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
HLA-DRAP01903 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRAP01903 MIR3917-201ENST00000580971 93 ntBASIC19.86■□□□□ 0.77
HLA-DRAP01903 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DRAP01903 AL031432.5-201ENST00000641059 760 ntBASIC19.86■□□□□ 0.77
HLA-DRAP01903 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRAP01903 SDHAP2-201ENST00000455183 2001 ntBASIC19.86■□□□□ 0.77
HLA-DRAP01903 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRAP01903 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRAP01903 AC009102.3-201ENST00000623118 1491 ntBASIC19.86■□□□□ 0.77
HLA-DRAP01903 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRAP01903 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
HLA-DRAP01903 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRAP01903 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRAP01903 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRAP01903 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRAP01903 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRAP01903 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
HLA-DRAP01903 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRAP01903 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRAP01903 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-DRAP01903 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-DRAP01903 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.85■□□□□ 0.77
HLA-DRAP01903 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
HLA-DRAP01903 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRAP01903 AL157888.1-201ENST00000631930 593 ntBASIC19.85■□□□□ 0.77
HLA-DRAP01903 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRAP01903 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
HLA-DRAP01903 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRAP01903 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRAP01903 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRAP01903 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
HLA-DRAP01903 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRAP01903 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.85■□□□□ 0.77
HLA-DRAP01903 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
HLA-DRAP01903 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HLA-DRAP01903 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRAP01903 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRAP01903 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
HLA-DRAP01903 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRAP01903 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRAP01903 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.84■□□□□ 0.77
HLA-DRAP01903 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.84■□□□□ 0.77
HLA-DRAP01903 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRAP01903 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRAP01903 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.84■□□□□ 0.77
HLA-DRAP01903 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HLA-DRAP01903 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms