Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ALDH1A1P00352 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
ALDH1A1P00352 LINC01521-201ENST00000504184 1943 ntBASIC21.03■□□□□ 0.96
ALDH1A1P00352 GABARAPL3-202ENST00000624044 1851 ntBASIC21.03■□□□□ 0.96
ALDH1A1P00352 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.03■□□□□ 0.96
ALDH1A1P00352 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ALDH1A1P00352 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALDH1A1P00352 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ALDH1A1P00352 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ALDH1A1P00352 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.02■□□□□ 0.96
ALDH1A1P00352 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.02■□□□□ 0.96
ALDH1A1P00352 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
ALDH1A1P00352 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALDH1A1P00352 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.02■□□□□ 0.96
ALDH1A1P00352 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ALDH1A1P00352 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.02■□□□□ 0.96
ALDH1A1P00352 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.02■□□□□ 0.96
ALDH1A1P00352 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.02■□□□□ 0.96
ALDH1A1P00352 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC21.02■□□□□ 0.96
ALDH1A1P00352 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALDH1A1P00352 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.02■□□□□ 0.96
ALDH1A1P00352 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.02■□□□□ 0.96
ALDH1A1P00352 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC21.02■□□□□ 0.96
ALDH1A1P00352 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.02■□□□□ 0.96
ALDH1A1P00352 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ALDH1A1P00352 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALDH1A1P00352 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALDH1A1P00352 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALDH1A1P00352 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALDH1A1P00352 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ALDH1A1P00352 AC125634.1-201ENST00000438758 1403 ntBASIC21.02■□□□□ 0.96
ALDH1A1P00352 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.02■□□□□ 0.96
ALDH1A1P00352 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ALDH1A1P00352 AC099778.1-201ENST00000568593 1911 ntBASIC21.02■□□□□ 0.95
ALDH1A1P00352 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.01■□□□□ 0.95
ALDH1A1P00352 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ALDH1A1P00352 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ALDH1A1P00352 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ALDH1A1P00352 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ALDH1A1P00352 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ALDH1A1P00352 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ALDH1A1P00352 AC023274.1-201ENST00000418278 595 ntBASIC21.01■□□□□ 0.95
ALDH1A1P00352 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.01■□□□□ 0.95
ALDH1A1P00352 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.01■□□□□ 0.95
ALDH1A1P00352 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.01■□□□□ 0.95
ALDH1A1P00352 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
ALDH1A1P00352 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.01■□□□□ 0.95
ALDH1A1P00352 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.01■□□□□ 0.95
ALDH1A1P00352 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.01■□□□□ 0.95
ALDH1A1P00352 SNHG9-202ENST00000564014 471 ntBASIC21.01■□□□□ 0.95
ALDH1A1P00352 AC092364.2-202ENST00000597012 1073 ntBASIC21.01■□□□□ 0.95
ALDH1A1P00352 MTDHP4-201ENST00000600287 670 ntBASIC21.01■□□□□ 0.95
ALDH1A1P00352 AL596442.2-201ENST00000610240 980 ntBASIC21.01■□□□□ 0.95
ALDH1A1P00352 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ALDH1A1P00352 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.01■□□□□ 0.95
ALDH1A1P00352 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ALDH1A1P00352 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.01■□□□□ 0.95
ALDH1A1P00352 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.01■□□□□ 0.95
ALDH1A1P00352 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ALDH1A1P00352 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ALDH1A1P00352 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALDH1A1P00352 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALDH1A1P00352 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21■□□□□ 0.95
ALDH1A1P00352 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALDH1A1P00352 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALDH1A1P00352 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21■□□□□ 0.95
ALDH1A1P00352 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21■□□□□ 0.95
ALDH1A1P00352 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21■□□□□ 0.95
ALDH1A1P00352 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21■□□□□ 0.95
ALDH1A1P00352 LAGE3P1-201ENST00000425356 484 ntBASIC21■□□□□ 0.95
ALDH1A1P00352 PON3-203ENST00000427422 894 ntTSL 3 BASIC21■□□□□ 0.95
ALDH1A1P00352 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21■□□□□ 0.95
ALDH1A1P00352 KRT18P41-201ENST00000518924 1277 ntBASIC21■□□□□ 0.95
ALDH1A1P00352 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21■□□□□ 0.95
ALDH1A1P00352 AC005829.1-201ENST00000570002 483 ntBASIC21■□□□□ 0.95
ALDH1A1P00352 AC009154.2-201ENST00000621177 724 ntBASIC21■□□□□ 0.95
ALDH1A1P00352 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21■□□□□ 0.95
ALDH1A1P00352 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21■□□□□ 0.95
ALDH1A1P00352 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21■□□□□ 0.95
ALDH1A1P00352 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21■□□□□ 0.95
ALDH1A1P00352 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALDH1A1P00352 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALDH1A1P00352 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A1P00352 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ALDH1A1P00352 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A1P00352 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A1P00352 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A1P00352 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.99■□□□□ 0.95
ALDH1A1P00352 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.99■□□□□ 0.95
ALDH1A1P00352 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.99■□□□□ 0.95
ALDH1A1P00352 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
ALDH1A1P00352 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A1P00352 MCCD1P2-201ENST00000423228 335 ntBASIC20.99■□□□□ 0.95
ALDH1A1P00352 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.99■□□□□ 0.95
ALDH1A1P00352 AC009947.1-201ENST00000444350 727 ntBASIC20.99■□□□□ 0.95
ALDH1A1P00352 MTCL1P1-201ENST00000446207 792 ntBASIC20.99■□□□□ 0.95
ALDH1A1P00352 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.99■□□□□ 0.95
ALDH1A1P00352 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A1P00352 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A1P00352 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms