Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN1O95832 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN1O95832 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN1O95832 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN1O95832 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN1O95832 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN1O95832 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN1O95832 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN1O95832 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN1O95832 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN1O95832 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN1O95832 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CLDN1O95832 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN1O95832 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN1O95832 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN1O95832 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN1O95832 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN1O95832 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CLDN1O95832 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CLDN1O95832 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN1O95832 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.48■□□□□ 0.23
CLDN1O95832 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN1O95832 AL031284.1-201ENST00000419297 478 ntBASIC16.48■□□□□ 0.23
CLDN1O95832 RNPS1P1-201ENST00000507437 918 ntBASIC16.48■□□□□ 0.23
CLDN1O95832 AL691403.2-201ENST00000618460 490 ntBASIC16.48■□□□□ 0.23
CLDN1O95832 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.48■□□□□ 0.23
CLDN1O95832 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLDN1O95832 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.48■□□□□ 0.23
CLDN1O95832 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.48■□□□□ 0.23
CLDN1O95832 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN1O95832 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN1O95832 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN1O95832 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN1O95832 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN1O95832 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CLDN1O95832 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN1O95832 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN1O95832 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN1O95832 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CLDN1O95832 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN1O95832 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CLDN1O95832 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN1O95832 AP001271.2-201ENST00000624018 1556 ntBASIC16.47■□□□□ 0.23
CLDN1O95832 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN1O95832 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CLDN1O95832 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN1O95832 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN1O95832 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN1O95832 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN1O95832 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN1O95832 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN1O95832 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN1O95832 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN1O95832 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN1O95832 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN1O95832 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN1O95832 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN1O95832 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN1O95832 IGHV3-47-201ENST00000425060 335 ntBASIC16.47■□□□□ 0.23
CLDN1O95832 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN1O95832 FAM197Y8-203ENST00000450145 560 ntBASIC16.47■□□□□ 0.23
CLDN1O95832 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN1O95832 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN1O95832 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN1O95832 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN1O95832 MIR3917-201ENST00000580971 93 ntBASIC16.47■□□□□ 0.23
CLDN1O95832 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN1O95832 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN1O95832 Z69720.1-201ENST00000601483 472 ntBASIC16.47■□□□□ 0.23
CLDN1O95832 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN1O95832 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLDN1O95832 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLDN1O95832 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN1O95832 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
CLDN1O95832 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN1O95832 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN1O95832 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN1O95832 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CLDN1O95832 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN1O95832 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CLDN1O95832 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CLDN1O95832 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms