Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN3O95197 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTN3O95197 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.47■□□□□ 0.71
RTN3O95197 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.47■□□□□ 0.71
RTN3O95197 AC116407.4-201ENST00000623319 1061 ntBASIC19.47■□□□□ 0.71
RTN3O95197 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.47■□□□□ 0.71
RTN3O95197 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN3O95197 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN3O95197 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN3O95197 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTN3O95197 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RTN3O95197 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN3O95197 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN3O95197 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN3O95197 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTN3O95197 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN3O95197 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN3O95197 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.46■□□□□ 0.71
RTN3O95197 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTN3O95197 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN3O95197 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN3O95197 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RTN3O95197 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RTN3O95197 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTN3O95197 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.46■□□□□ 0.71
RTN3O95197 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RTN3O95197 AL136038.4-201ENST00000603606 1261 ntBASIC19.46■□□□□ 0.71
RTN3O95197 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTN3O95197 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RTN3O95197 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.46■□□□□ 0.71
RTN3O95197 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN3O95197 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.46■□□□□ 0.71
RTN3O95197 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN3O95197 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN3O95197 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN3O95197 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTN3O95197 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTN3O95197 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN3O95197 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN3O95197 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN3O95197 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.46■□□□□ 0.71
RTN3O95197 AP000974.1-201ENST00000623909 2387 ntBASIC19.46■□□□□ 0.71
RTN3O95197 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN3O95197 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN3O95197 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN3O95197 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTN3O95197 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTN3O95197 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTN3O95197 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN3O95197 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN3O95197 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN3O95197 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RTN3O95197 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.45■□□□□ 0.7
RTN3O95197 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN3O95197 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.45■□□□□ 0.7
RTN3O95197 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN3O95197 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN3O95197 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
RTN3O95197 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.45■□□□□ 0.7
RTN3O95197 UPK3BP1-201ENST00000428678 509 ntBASIC19.45■□□□□ 0.7
RTN3O95197 HLA-F-220ENST00000434407 884 ntBASIC19.45■□□□□ 0.7
RTN3O95197 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
RTN3O95197 AC079602.3-201ENST00000623931 403 ntBASIC19.45■□□□□ 0.7
RTN3O95197 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.45■□□□□ 0.7
RTN3O95197 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RTN3O95197 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RTN3O95197 AC120498.9-201ENST00000339021 3867 ntBASIC19.45■□□□□ 0.7
RTN3O95197 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN3O95197 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN3O95197 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN3O95197 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RTN3O95197 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN3O95197 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RTN3O95197 AL391807.1-203ENST00000604392 2365 ntBASIC19.44■□□□□ 0.7
RTN3O95197 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN3O95197 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN3O95197 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN3O95197 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN3O95197 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RTN3O95197 KRT8P50-201ENST00000562022 1438 ntBASIC19.44■□□□□ 0.7
RTN3O95197 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN3O95197 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN3O95197 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN3O95197 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.44■□□□□ 0.7
RTN3O95197 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.44■□□□□ 0.7
RTN3O95197 SPDYE13P-201ENST00000445314 798 ntBASIC19.44■□□□□ 0.7
RTN3O95197 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN3O95197 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN3O95197 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.44■□□□□ 0.7
RTN3O95197 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.44■□□□□ 0.7
RTN3O95197 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN3O95197 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.44■□□□□ 0.7
RTN3O95197 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.44■□□□□ 0.7
RTN3O95197 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN3O95197 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN3O95197 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN3O95197 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN3O95197 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN3O95197 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RTN3O95197 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms