Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC24.45■■□□□ 1.5
LTN1O94822 AP001269.4-201ENST00000609611 512 ntBASIC24.45■■□□□ 1.5
LTN1O94822 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC24.45■■□□□ 1.5
LTN1O94822 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
LTN1O94822 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
LTN1O94822 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LTN1O94822 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
LTN1O94822 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LTN1O94822 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
LTN1O94822 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LTN1O94822 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
LTN1O94822 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
LTN1O94822 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LTN1O94822 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
LTN1O94822 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LTN1O94822 AF186996.4-201ENST00000467186 377 ntBASIC24.44■■□□□ 1.5
LTN1O94822 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC24.44■■□□□ 1.5
LTN1O94822 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LTN1O94822 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LTN1O94822 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LTN1O94822 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LTN1O94822 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
LTN1O94822 ADK-206ENST00000541550 2222 ntTSL 2 BASIC24.44■■□□□ 1.5
LTN1O94822 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LTN1O94822 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC24.44■■□□□ 1.5
LTN1O94822 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
LTN1O94822 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC24.44■■□□□ 1.5
LTN1O94822 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LTN1O94822 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LTN1O94822 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC24.44■■□□□ 1.5
LTN1O94822 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LTN1O94822 RPL18-209ENST00000550645 463 ntTSL 5 BASIC24.44■■□□□ 1.5
LTN1O94822 RPL18-214ENST00000552588 559 ntTSL 3 BASIC24.44■■□□□ 1.5
LTN1O94822 AC145285.3-201ENST00000564603 959 ntBASIC24.44■■□□□ 1.5
LTN1O94822 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC24.44■■□□□ 1.5
LTN1O94822 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LTN1O94822 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC24.44■■□□□ 1.5
LTN1O94822 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
LTN1O94822 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
LTN1O94822 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
LTN1O94822 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LTN1O94822 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
LTN1O94822 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC24.43■■□□□ 1.5
LTN1O94822 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC24.43■■□□□ 1.5
LTN1O94822 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.43■■□□□ 1.5
LTN1O94822 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LTN1O94822 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LTN1O94822 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
LTN1O94822 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC24.43■■□□□ 1.5
LTN1O94822 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LTN1O94822 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
LTN1O94822 MOK-208ENST00000519058 917 ntTSL 2 BASIC24.43■■□□□ 1.5
LTN1O94822 AL049840.3-201ENST00000602669 611 ntBASIC24.43■■□□□ 1.5
LTN1O94822 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
LTN1O94822 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
LTN1O94822 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LTN1O94822 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LTN1O94822 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LTN1O94822 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LTN1O94822 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
LTN1O94822 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC24.42■■□□□ 1.5
LTN1O94822 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LTN1O94822 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
LTN1O94822 AC006538.3-201ENST00000612495 578 ntBASIC24.42■■□□□ 1.5
LTN1O94822 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LTN1O94822 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC24.42■■□□□ 1.5
LTN1O94822 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
LTN1O94822 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LTN1O94822 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC24.42■■□□□ 1.5
LTN1O94822 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LTN1O94822 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LTN1O94822 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LTN1O94822 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LTN1O94822 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC24.42■■□□□ 1.5
LTN1O94822 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC24.42■■□□□ 1.5
LTN1O94822 AC139887.3-201ENST00000568585 713 ntBASIC24.42■■□□□ 1.5
LTN1O94822 GPALPP1-207ENST00000611650 899 ntBASIC24.42■■□□□ 1.5
LTN1O94822 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC24.42■■□□□ 1.5
LTN1O94822 AL355877.3-201ENST00000622820 899 ntBASIC24.42■■□□□ 1.5
LTN1O94822 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
LTN1O94822 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LTN1O94822 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
LTN1O94822 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LTN1O94822 USP39-202ENST00000409025 1946 ntTSL 5 BASIC24.41■■□□□ 1.5
LTN1O94822 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LTN1O94822 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LTN1O94822 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LTN1O94822 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC24.41■■□□□ 1.5
LTN1O94822 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
LTN1O94822 KRT18P58-201ENST00000527480 1120 ntBASIC24.41■■□□□ 1.5
LTN1O94822 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC24.41■■□□□ 1.5
LTN1O94822 LITAF-211ENST00000572255 516 ntTSL 4 BASIC24.41■■□□□ 1.5
LTN1O94822 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
LTN1O94822 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
LTN1O94822 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LTN1O94822 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LTN1O94822 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LTN1O94822 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LTN1O94822 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
LTN1O94822 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms