Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.13■□□□□ 0.17
UPK1BO75841 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.13■□□□□ 0.17
UPK1BO75841 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1BO75841 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.13■□□□□ 0.17
UPK1BO75841 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
UPK1BO75841 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
UPK1BO75841 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.13■□□□□ 0.17
UPK1BO75841 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1BO75841 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
UPK1BO75841 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1BO75841 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1BO75841 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
UPK1BO75841 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
UPK1BO75841 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
UPK1BO75841 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1BO75841 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
UPK1BO75841 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1BO75841 LINC00554-201ENST00000564841 3011 ntBASIC16.13■□□□□ 0.17
UPK1BO75841 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.13■□□□□ 0.17
UPK1BO75841 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1BO75841 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.12■□□□□ 0.17
UPK1BO75841 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1BO75841 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.12■□□□□ 0.17
UPK1BO75841 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.12■□□□□ 0.17
UPK1BO75841 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1BO75841 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1BO75841 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1BO75841 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1BO75841 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1BO75841 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.12■□□□□ 0.17
UPK1BO75841 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1BO75841 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.12■□□□□ 0.17
UPK1BO75841 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.12■□□□□ 0.17
UPK1BO75841 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.12■□□□□ 0.17
UPK1BO75841 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.12■□□□□ 0.17
UPK1BO75841 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1BO75841 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.12■□□□□ 0.17
UPK1BO75841 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1BO75841 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
UPK1BO75841 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.12■□□□□ 0.17
UPK1BO75841 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1BO75841 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1BO75841 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1BO75841 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
UPK1BO75841 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
UPK1BO75841 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1BO75841 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
UPK1BO75841 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK1BO75841 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK1BO75841 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
UPK1BO75841 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK1BO75841 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK1BO75841 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK1BO75841 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.11■□□□□ 0.17
UPK1BO75841 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.11■□□□□ 0.17
UPK1BO75841 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK1BO75841 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK1BO75841 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.11■□□□□ 0.17
UPK1BO75841 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
UPK1BO75841 AC104187.1-201ENST00000607510 612 ntBASIC16.11■□□□□ 0.17
UPK1BO75841 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
UPK1BO75841 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
UPK1BO75841 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 CROCCP2-202ENST00000412962 2773 ntBASIC16.11■□□□□ 0.17
UPK1BO75841 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
UPK1BO75841 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK1BO75841 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1BO75841 AC112777.1-201ENST00000540175 1423 ntBASIC16.11■□□□□ 0.17
UPK1BO75841 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1BO75841 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1BO75841 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1BO75841 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1BO75841 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1BO75841 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1BO75841 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.1■□□□□ 0.17
UPK1BO75841 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
UPK1BO75841 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.1■□□□□ 0.17
UPK1BO75841 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.1■□□□□ 0.17
UPK1BO75841 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.1■□□□□ 0.17
UPK1BO75841 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1BO75841 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UPK1BO75841 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1BO75841 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
UPK1BO75841 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms