Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.75□□□□□ -0.05
CUBNO60494 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CUBNO60494 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.75□□□□□ -0.05
CUBNO60494 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUBNO60494 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CUBNO60494 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CUBNO60494 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CUBNO60494 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.75□□□□□ -0.05
CUBNO60494 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUBNO60494 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.75□□□□□ -0.05
CUBNO60494 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.75□□□□□ -0.05
CUBNO60494 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CUBNO60494 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.75□□□□□ -0.05
CUBNO60494 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
CUBNO60494 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUBNO60494 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUBNO60494 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CUBNO60494 AC012676.1-201ENST00000574705 1949 ntBASIC14.75□□□□□ -0.05
CUBNO60494 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUBNO60494 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CUBNO60494 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUBNO60494 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CUBNO60494 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUBNO60494 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.74□□□□□ -0.05
CUBNO60494 ALG1L5P-201ENST00000482043 771 ntBASIC14.74□□□□□ -0.05
CUBNO60494 AP003733.1-201ENST00000491725 852 ntBASIC14.74□□□□□ -0.05
CUBNO60494 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.74□□□□□ -0.05
CUBNO60494 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.74□□□□□ -0.05
CUBNO60494 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.74□□□□□ -0.05
CUBNO60494 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CUBNO60494 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUBNO60494 Z82202.1-201ENST00000623446 1880 ntBASIC14.74□□□□□ -0.05
CUBNO60494 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CUBNO60494 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUBNO60494 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUBNO60494 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUBNO60494 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUBNO60494 HTR5BP-201ENST00000430851 1154 ntBASIC14.74□□□□□ -0.05
CUBNO60494 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.74□□□□□ -0.05
CUBNO60494 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.74□□□□□ -0.05
CUBNO60494 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.74□□□□□ -0.05
CUBNO60494 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CUBNO60494 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CUBNO60494 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUBNO60494 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.74□□□□□ -0.05
CUBNO60494 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUBNO60494 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.74□□□□□ -0.05
CUBNO60494 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUBNO60494 AP005117.1-201ENST00000584346 1413 ntBASIC14.74□□□□□ -0.05
CUBNO60494 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.74□□□□□ -0.05
CUBNO60494 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CUBNO60494 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUBNO60494 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.74□□□□□ -0.05
CUBNO60494 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 YBX1P5-201ENST00000509441 847 ntBASIC14.73□□□□□ -0.05
CUBNO60494 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.73□□□□□ -0.05
CUBNO60494 AC024563.2-201ENST00000603282 481 ntBASIC14.73□□□□□ -0.05
CUBNO60494 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CUBNO60494 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CUBNO60494 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.73□□□□□ -0.05
CUBNO60494 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CUBNO60494 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.73□□□□□ -0.05
CUBNO60494 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.73□□□□□ -0.05
CUBNO60494 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 FAM8A3P-201ENST00000427218 844 ntBASIC14.73□□□□□ -0.05
CUBNO60494 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CUBNO60494 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CUBNO60494 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.73□□□□□ -0.05
CUBNO60494 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.73□□□□□ -0.05
CUBNO60494 VENTXP7-201ENST00000475503 772 ntBASIC14.73□□□□□ -0.05
CUBNO60494 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.73□□□□□ -0.05
CUBNO60494 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.73□□□□□ -0.05
CUBNO60494 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CUBNO60494 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CUBNO60494 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CUBNO60494 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CUBNO60494 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.73□□□□□ -0.05
CUBNO60494 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CUBNO60494 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CUBNO60494 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUBNO60494 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms