Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.48■□□□□ 0.55
LDB2O43679 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LDB2O43679 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.48■□□□□ 0.55
LDB2O43679 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 SEC1P-202ENST00000473944 940 ntBASIC18.48■□□□□ 0.55
LDB2O43679 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.48■□□□□ 0.55
LDB2O43679 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.48■□□□□ 0.55
LDB2O43679 NEK4P2-201ENST00000580004 1012 ntBASIC18.48■□□□□ 0.55
LDB2O43679 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.48■□□□□ 0.55
LDB2O43679 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.48■□□□□ 0.55
LDB2O43679 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
LDB2O43679 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.48■□□□□ 0.55
LDB2O43679 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.48■□□□□ 0.55
LDB2O43679 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB2O43679 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.47■□□□□ 0.55
LDB2O43679 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDB2O43679 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDB2O43679 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDB2O43679 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LDB2O43679 MIR149-201ENST00000384879 89 ntBASIC18.47■□□□□ 0.55
LDB2O43679 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LDB2O43679 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.47■□□□□ 0.55
LDB2O43679 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.47■□□□□ 0.55
LDB2O43679 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.47■□□□□ 0.55
LDB2O43679 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.47■□□□□ 0.55
LDB2O43679 AC010203.1-204ENST00000548782 407 ntBASIC18.47■□□□□ 0.55
LDB2O43679 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
LDB2O43679 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LDB2O43679 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.47■□□□□ 0.55
LDB2O43679 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDB2O43679 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LDB2O43679 AC093677.2-201ENST00000600169 1863 ntBASIC18.47■□□□□ 0.55
LDB2O43679 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDB2O43679 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.47■□□□□ 0.55
LDB2O43679 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDB2O43679 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LDB2O43679 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
LDB2O43679 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LDB2O43679 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LDB2O43679 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB2O43679 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.46■□□□□ 0.55
LDB2O43679 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB2O43679 AC009102.3-201ENST00000623118 1491 ntBASIC18.46■□□□□ 0.55
LDB2O43679 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB2O43679 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LDB2O43679 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LDB2O43679 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB2O43679 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.46■□□□□ 0.55
LDB2O43679 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB2O43679 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.46■□□□□ 0.55
LDB2O43679 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LDB2O43679 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB2O43679 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB2O43679 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.46■□□□□ 0.55
LDB2O43679 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.46■□□□□ 0.55
LDB2O43679 FAM210CP-201ENST00000445714 574 ntBASIC18.46■□□□□ 0.55
LDB2O43679 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.46■□□□□ 0.55
LDB2O43679 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.46■□□□□ 0.55
LDB2O43679 MIR3180-4-201ENST00000582223 153 ntBASIC18.46■□□□□ 0.55
LDB2O43679 AC024243.1-201ENST00000609234 778 ntBASIC18.46■□□□□ 0.55
LDB2O43679 AC141257.4-201ENST00000634557 245 ntBASIC18.46■□□□□ 0.55
LDB2O43679 AC136944.6-201ENST00000634818 245 ntBASIC18.46■□□□□ 0.55
LDB2O43679 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LDB2O43679 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.46■□□□□ 0.55
LDB2O43679 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB2O43679 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB2O43679 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB2O43679 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB2O43679 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LDB2O43679 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB2O43679 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB2O43679 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LDB2O43679 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LDB2O43679 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LDB2O43679 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LDB2O43679 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LDB2O43679 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
LDB2O43679 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LDB2O43679 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LDB2O43679 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LDB2O43679 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LDB2O43679 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LDB2O43679 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LDB2O43679 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms