Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHGDHO43175 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.41■□□□□ 0.54
PHGDHO43175 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHGDHO43175 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHGDHO43175 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHGDHO43175 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PHGDHO43175 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PHGDHO43175 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PHGDHO43175 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHGDHO43175 AL023284.2-201ENST00000405850 579 ntBASIC18.41■□□□□ 0.54
PHGDHO43175 MFAP1P1-201ENST00000442257 1255 ntBASIC18.41■□□□□ 0.54
PHGDHO43175 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.41■□□□□ 0.54
PHGDHO43175 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.41■□□□□ 0.54
PHGDHO43175 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PHGDHO43175 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.41■□□□□ 0.54
PHGDHO43175 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHGDHO43175 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PHGDHO43175 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PHGDHO43175 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.41■□□□□ 0.54
PHGDHO43175 AC096733.2-201ENST00000609937 1394 ntBASIC18.41■□□□□ 0.54
PHGDHO43175 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PHGDHO43175 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.41■□□□□ 0.54
PHGDHO43175 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHGDHO43175 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PHGDHO43175 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
PHGDHO43175 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PHGDHO43175 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.4■□□□□ 0.54
PHGDHO43175 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PHGDHO43175 AC093677.2-201ENST00000600169 1863 ntBASIC18.4■□□□□ 0.54
PHGDHO43175 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.4■□□□□ 0.54
PHGDHO43175 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHGDHO43175 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHGDHO43175 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.4■□□□□ 0.54
PHGDHO43175 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHGDHO43175 AL158047.1-201ENST00000445918 881 ntBASIC18.4■□□□□ 0.54
PHGDHO43175 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.4■□□□□ 0.54
PHGDHO43175 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.4■□□□□ 0.54
PHGDHO43175 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.4■□□□□ 0.54
PHGDHO43175 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.4■□□□□ 0.54
PHGDHO43175 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
PHGDHO43175 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHGDHO43175 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.4■□□□□ 0.54
PHGDHO43175 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHGDHO43175 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PHGDHO43175 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
PHGDHO43175 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PHGDHO43175 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHGDHO43175 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PHGDHO43175 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHGDHO43175 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
PHGDHO43175 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
PHGDHO43175 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.54
PHGDHO43175 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PHGDHO43175 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.39■□□□□ 0.53
PHGDHO43175 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHGDHO43175 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PHGDHO43175 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PHGDHO43175 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PHGDHO43175 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHGDHO43175 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.39■□□□□ 0.53
PHGDHO43175 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHGDHO43175 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PHGDHO43175 NUDT16P1-203ENST00000513809 620 ntBASIC18.39■□□□□ 0.53
PHGDHO43175 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.39■□□□□ 0.53
PHGDHO43175 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.39■□□□□ 0.53
PHGDHO43175 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.39■□□□□ 0.53
PHGDHO43175 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.39■□□□□ 0.53
PHGDHO43175 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.39■□□□□ 0.53
PHGDHO43175 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PHGDHO43175 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHGDHO43175 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PHGDHO43175 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHGDHO43175 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHGDHO43175 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHGDHO43175 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHGDHO43175 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.39■□□□□ 0.53
PHGDHO43175 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PHGDHO43175 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PHGDHO43175 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.39■□□□□ 0.53
PHGDHO43175 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHGDHO43175 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHGDHO43175 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PHGDHO43175 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
PHGDHO43175 BCL2-203ENST00000589955 5011 ntBASIC18.38■□□□□ 0.53
PHGDHO43175 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PHGDHO43175 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PHGDHO43175 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHGDHO43175 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.38■□□□□ 0.53
PHGDHO43175 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PHGDHO43175 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
PHGDHO43175 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHGDHO43175 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHGDHO43175 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PHGDHO43175 MCCD1P1-208ENST00000445732 328 ntBASIC18.38■□□□□ 0.53
PHGDHO43175 AC116562.2-201ENST00000507042 360 ntBASIC18.38■□□□□ 0.53
PHGDHO43175 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.38■□□□□ 0.53
PHGDHO43175 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PHGDHO43175 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHGDHO43175 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHGDHO43175 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms