Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.79■□□□□ 0.28
SMAD9O15198 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SMAD9O15198 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD9O15198 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SMAD9O15198 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.79■□□□□ 0.28
SMAD9O15198 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD9O15198 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD9O15198 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.79■□□□□ 0.28
SMAD9O15198 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD9O15198 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD9O15198 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD9O15198 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD9O15198 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD9O15198 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
SMAD9O15198 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SMAD9O15198 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
SMAD9O15198 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD9O15198 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD9O15198 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SMAD9O15198 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.78■□□□□ 0.28
SMAD9O15198 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
SMAD9O15198 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.78■□□□□ 0.28
SMAD9O15198 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD9O15198 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.78■□□□□ 0.28
SMAD9O15198 AC010203.1-204ENST00000548782 407 ntBASIC16.78■□□□□ 0.28
SMAD9O15198 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.78■□□□□ 0.28
SMAD9O15198 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
SMAD9O15198 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.78■□□□□ 0.28
SMAD9O15198 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.78■□□□□ 0.28
SMAD9O15198 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD9O15198 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
SMAD9O15198 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SMAD9O15198 AL109659.2-201ENST00000606809 1674 ntBASIC16.78■□□□□ 0.28
SMAD9O15198 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.78■□□□□ 0.28
SMAD9O15198 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD9O15198 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD9O15198 KRT8P45-201ENST00000414328 1447 ntBASIC16.78■□□□□ 0.28
SMAD9O15198 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD9O15198 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD9O15198 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD9O15198 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD9O15198 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD9O15198 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SMAD9O15198 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
SMAD9O15198 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD9O15198 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.77■□□□□ 0.28
SMAD9O15198 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD9O15198 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD9O15198 TERF1P1-201ENST00000311003 1181 ntBASIC16.77■□□□□ 0.28
SMAD9O15198 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SMAD9O15198 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.77■□□□□ 0.28
SMAD9O15198 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SMAD9O15198 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.77■□□□□ 0.28
SMAD9O15198 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.77■□□□□ 0.28
SMAD9O15198 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD9O15198 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SMAD9O15198 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SMAD9O15198 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.77■□□□□ 0.28
SMAD9O15198 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SMAD9O15198 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.77■□□□□ 0.28
SMAD9O15198 HEIH-201ENST00000623091 1652 ntBASIC16.77■□□□□ 0.28
SMAD9O15198 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SMAD9O15198 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMAD9O15198 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMAD9O15198 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.77■□□□□ 0.27
SMAD9O15198 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMAD9O15198 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD9O15198 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.76■□□□□ 0.27
SMAD9O15198 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD9O15198 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD9O15198 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD9O15198 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD9O15198 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.76■□□□□ 0.27
SMAD9O15198 AC008556.1-201ENST00000610908 2040 ntBASIC16.76■□□□□ 0.27
SMAD9O15198 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD9O15198 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD9O15198 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD9O15198 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SMAD9O15198 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.76■□□□□ 0.27
SMAD9O15198 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.76■□□□□ 0.27
SMAD9O15198 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.76■□□□□ 0.27
SMAD9O15198 CR769767.2-201ENST00000622735 460 ntBASIC16.76■□□□□ 0.27
SMAD9O15198 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD9O15198 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.76■□□□□ 0.27
SMAD9O15198 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.76■□□□□ 0.27
SMAD9O15198 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SMAD9O15198 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
SMAD9O15198 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD9O15198 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.76■□□□□ 0.27
SMAD9O15198 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD9O15198 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD9O15198 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SMAD9O15198 AC036111.1-201ENST00000533973 1582 ntBASIC16.76■□□□□ 0.27
SMAD9O15198 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SMAD9O15198 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD9O15198 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.75■□□□□ 0.27
SMAD9O15198 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD9O15198 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms