Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.95■□□□□ 0.46
UBFD1O14562 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBFD1O14562 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.95■□□□□ 0.46
UBFD1O14562 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UBFD1O14562 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.95■□□□□ 0.46
UBFD1O14562 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.95■□□□□ 0.46
UBFD1O14562 MFAP1P1-201ENST00000442257 1255 ntBASIC17.95■□□□□ 0.46
UBFD1O14562 MCCD1P1-208ENST00000445732 328 ntBASIC17.95■□□□□ 0.46
UBFD1O14562 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.95■□□□□ 0.46
UBFD1O14562 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.95■□□□□ 0.46
UBFD1O14562 SLC25A1P4-201ENST00000567977 778 ntBASIC17.95■□□□□ 0.46
UBFD1O14562 ITM2C-210ENST00000620962 501 ntBASIC17.95■□□□□ 0.46
UBFD1O14562 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBFD1O14562 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBFD1O14562 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UBFD1O14562 AL096828.2-201ENST00000567259 1965 ntBASIC17.95■□□□□ 0.46
UBFD1O14562 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
UBFD1O14562 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.95■□□□□ 0.46
UBFD1O14562 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.95■□□□□ 0.46
UBFD1O14562 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBFD1O14562 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBFD1O14562 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBFD1O14562 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
UBFD1O14562 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBFD1O14562 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBFD1O14562 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
UBFD1O14562 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBFD1O14562 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBFD1O14562 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBFD1O14562 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
UBFD1O14562 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBFD1O14562 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBFD1O14562 NUDT16P1-203ENST00000513809 620 ntBASIC17.94■□□□□ 0.46
UBFD1O14562 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.94■□□□□ 0.46
UBFD1O14562 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.94■□□□□ 0.46
UBFD1O14562 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.94■□□□□ 0.46
UBFD1O14562 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBFD1O14562 TMEM191A-211ENST00000637163 1067 ntBASIC17.94■□□□□ 0.46
UBFD1O14562 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.94■□□□□ 0.46
UBFD1O14562 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBFD1O14562 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.94■□□□□ 0.46
UBFD1O14562 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
UBFD1O14562 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.94■□□□□ 0.46
UBFD1O14562 PHGDH-209ENST00000641074 1780 ntBASIC17.94■□□□□ 0.46
UBFD1O14562 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBFD1O14562 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.93■□□□□ 0.46
UBFD1O14562 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBFD1O14562 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.93■□□□□ 0.46
UBFD1O14562 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBFD1O14562 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBFD1O14562 PRORSD1P-201ENST00000295112 541 ntBASIC17.93■□□□□ 0.46
UBFD1O14562 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
UBFD1O14562 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
UBFD1O14562 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
UBFD1O14562 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBFD1O14562 AP000593.1-201ENST00000393668 712 ntBASIC17.93■□□□□ 0.46
UBFD1O14562 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBFD1O14562 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBFD1O14562 TSPY20P-201ENST00000450910 630 ntBASIC17.93■□□□□ 0.46
UBFD1O14562 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.93■□□□□ 0.46
UBFD1O14562 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.93■□□□□ 0.46
UBFD1O14562 MIR4674-201ENST00000582457 87 ntBASIC17.93■□□□□ 0.46
UBFD1O14562 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.93■□□□□ 0.46
UBFD1O14562 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.93■□□□□ 0.46
UBFD1O14562 DGCR10-201ENST00000609839 495 ntBASIC17.93■□□□□ 0.46
UBFD1O14562 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.93■□□□□ 0.46
UBFD1O14562 AC034236.2-201ENST00000606662 1610 ntBASIC17.93■□□□□ 0.46
UBFD1O14562 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.93■□□□□ 0.46
UBFD1O14562 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
UBFD1O14562 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
UBFD1O14562 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
UBFD1O14562 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBFD1O14562 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.93■□□□□ 0.46
UBFD1O14562 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
UBFD1O14562 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBFD1O14562 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBFD1O14562 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBFD1O14562 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBFD1O14562 AL135905.2-201ENST00000584934 1404 ntBASIC17.92■□□□□ 0.46
UBFD1O14562 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.92■□□□□ 0.46
UBFD1O14562 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBFD1O14562 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBFD1O14562 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.92■□□□□ 0.46
UBFD1O14562 SLC25A6P5-201ENST00000435663 894 ntBASIC17.92■□□□□ 0.46
UBFD1O14562 FAM201B-201ENST00000458407 597 ntBASIC17.92■□□□□ 0.46
UBFD1O14562 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBFD1O14562 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.92■□□□□ 0.46
UBFD1O14562 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
UBFD1O14562 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.92■□□□□ 0.46
UBFD1O14562 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.92■□□□□ 0.46
UBFD1O14562 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBFD1O14562 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBFD1O14562 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
UBFD1O14562 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBFD1O14562 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.92■□□□□ 0.46
UBFD1O14562 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBFD1O14562 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
UBFD1O14562 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBFD1O14562 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBFD1O14562 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms