Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFA4O00483 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.19□□□□□ -0.14
NDUFA4O00483 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.19□□□□□ -0.14
NDUFA4O00483 MIR3180-4-201ENST00000582223 153 ntBASIC14.19□□□□□ -0.14
NDUFA4O00483 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NDUFA4O00483 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NDUFA4O00483 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 AC104581.1-202ENST00000635932 2618 ntBASIC14.19□□□□□ -0.14
NDUFA4O00483 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
NDUFA4O00483 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.19□□□□□ -0.14
NDUFA4O00483 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NDUFA4O00483 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NDUFA4O00483 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.19□□□□□ -0.14
NDUFA4O00483 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.18□□□□□ -0.14
NDUFA4O00483 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NDUFA4O00483 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.18□□□□□ -0.14
NDUFA4O00483 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.18□□□□□ -0.14
NDUFA4O00483 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.18□□□□□ -0.14
NDUFA4O00483 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
NDUFA4O00483 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.18□□□□□ -0.14
NDUFA4O00483 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
NDUFA4O00483 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 MIR149-201ENST00000384879 89 ntBASIC14.18□□□□□ -0.14
NDUFA4O00483 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 AC104390.1-201ENST00000555663 520 ntBASIC14.18□□□□□ -0.14
NDUFA4O00483 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.18□□□□□ -0.14
NDUFA4O00483 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.18□□□□□ -0.14
NDUFA4O00483 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.18□□□□□ -0.14
NDUFA4O00483 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
NDUFA4O00483 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NDUFA4O00483 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
NDUFA4O00483 AL163051.1-201ENST00000569214 1512 ntBASIC14.18□□□□□ -0.14
NDUFA4O00483 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.18□□□□□ -0.14
NDUFA4O00483 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.18□□□□□ -0.14
NDUFA4O00483 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.18□□□□□ -0.14
NDUFA4O00483 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
NDUFA4O00483 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NDUFA4O00483 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
NDUFA4O00483 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA4O00483 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA4O00483 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA4O00483 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.17□□□□□ -0.14
NDUFA4O00483 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA4O00483 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA4O00483 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA4O00483 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA4O00483 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NDUFA4O00483 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA4O00483 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFA4O00483 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NDUFA4O00483 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA4O00483 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA4O00483 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.17□□□□□ -0.14
NDUFA4O00483 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA4O00483 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NDUFA4O00483 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA4O00483 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA4O00483 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA4O00483 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA4O00483 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.17□□□□□ -0.14
NDUFA4O00483 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFA4O00483 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA4O00483 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA4O00483 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFA4O00483 AC009947.2-201ENST00000444014 672 ntBASIC14.17□□□□□ -0.14
NDUFA4O00483 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms