Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 AC005829.2-201ENST00000571422 1056 ntBASIC13.53□□□□□ -0.24
SMKR1H3BMG3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 OR10C1-204ENST00000622521 1039 ntBASIC13.53□□□□□ -0.24
SMKR1H3BMG3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SMKR1H3BMG3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
SMKR1H3BMG3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SMKR1H3BMG3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
SMKR1H3BMG3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SMKR1H3BMG3 PP12613-201ENST00000424958 2230 ntBASIC13.52□□□□□ -0.24
SMKR1H3BMG3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SMKR1H3BMG3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SMKR1H3BMG3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SMKR1H3BMG3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SMKR1H3BMG3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SMKR1H3BMG3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
SMKR1H3BMG3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 TSPY21P-201ENST00000433481 731 ntBASIC13.52□□□□□ -0.25
SMKR1H3BMG3 SLC25A6P5-201ENST00000435663 894 ntBASIC13.52□□□□□ -0.25
SMKR1H3BMG3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 AD000864.1-201ENST00000624076 2295 ntBASIC13.52□□□□□ -0.25
SMKR1H3BMG3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMKR1H3BMG3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 TUBB8P6-201ENST00000436895 1288 ntBASIC13.51□□□□□ -0.25
SMKR1H3BMG3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 TSPY23P-201ENST00000440136 739 ntBASIC13.51□□□□□ -0.25
SMKR1H3BMG3 KRT18P16-201ENST00000510337 1294 ntBASIC13.51□□□□□ -0.25
SMKR1H3BMG3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms