Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.32■□□□□ 0.36
C1QTNF9BB2RNN3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.32■□□□□ 0.36
C1QTNF9BB2RNN3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
C1QTNF9BB2RNN3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.32■□□□□ 0.36
C1QTNF9BB2RNN3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.32■□□□□ 0.36
C1QTNF9BB2RNN3 AL109659.2-201ENST00000606809 1674 ntBASIC17.32■□□□□ 0.36
C1QTNF9BB2RNN3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.32■□□□□ 0.36
C1QTNF9BB2RNN3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C1QTNF9BB2RNN3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
C1QTNF9BB2RNN3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.32■□□□□ 0.36
C1QTNF9BB2RNN3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C1QTNF9BB2RNN3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 AL356309.3-201ENST00000624132 1934 ntBASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 AL162377.1-201ENST00000618844 1793 ntBASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 AC093028.1-201ENST00000622998 982 ntBASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 KRT89P-201ENST00000620027 1478 ntBASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
C1QTNF9BB2RNN3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 GK-202ENST00000378941 458 ntTSL 3 BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 RCC2P3-201ENST00000418112 1537 ntBASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
C1QTNF9BB2RNN3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C1QTNF9BB2RNN3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms