Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 FAM215A-202ENST00000632077 792 ntBASIC18.06■□□□□ 0.48
C4orf47A7E2U8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.05■□□□□ 0.48
C4orf47A7E2U8 AC096582.2-201ENST00000510860 516 ntBASIC18.05■□□□□ 0.48
C4orf47A7E2U8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 AC116407.3-201ENST00000623905 1129 ntBASIC18.05■□□□□ 0.48
C4orf47A7E2U8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.05■□□□□ 0.48
C4orf47A7E2U8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 AC022898.2-201ENST00000616822 1312 ntBASIC18.04■□□□□ 0.48
C4orf47A7E2U8 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.04■□□□□ 0.48
C4orf47A7E2U8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 AC027796.2-201ENST00000575326 344 ntBASIC18.04■□□□□ 0.48
C4orf47A7E2U8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 AL512353.2-201ENST00000448759 1962 ntBASIC18.04■□□□□ 0.48
C4orf47A7E2U8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 TREX1-205ENST00000625293 1783 ntBASIC18.04■□□□□ 0.48
C4orf47A7E2U8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.04■□□□□ 0.48
C4orf47A7E2U8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 PGAM5P1-201ENST00000518923 814 ntBASIC18.03■□□□□ 0.48
C4orf47A7E2U8 AC140113.2-201ENST00000604370 208 ntBASIC18.03■□□□□ 0.48
C4orf47A7E2U8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.03■□□□□ 0.48
C4orf47A7E2U8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms