Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF25A6NGN4 KRT18P22-201ENST00000402024 1347 ntBASIC17.35■□□□□ 0.37
PRAMEF25A6NGN4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.35■□□□□ 0.37
PRAMEF25A6NGN4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF25A6NGN4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.35■□□□□ 0.37
PRAMEF25A6NGN4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PRAMEF25A6NGN4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF25A6NGN4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 AL162741.1-201ENST00000565563 1558 ntBASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 AL023803.3-201ENST00000615559 522 ntBASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 AC097493.4-201ENST00000641197 219 ntBASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PRAMEF25A6NGN4 AC135776.1-201ENST00000319817 2481 ntBASIC17.33■□□□□ 0.37
PRAMEF25A6NGN4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.33■□□□□ 0.37
PRAMEF25A6NGN4 AP000997.3-201ENST00000623333 2250 ntBASIC17.33■□□□□ 0.37
PRAMEF25A6NGN4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.33■□□□□ 0.37
PRAMEF25A6NGN4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEF25A6NGN4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEF25A6NGN4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEF25A6NGN4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.33■□□□□ 0.37
PRAMEF25A6NGN4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
PRAMEF25A6NGN4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PRAMEF25A6NGN4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PRAMEF25A6NGN4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.33■□□□□ 0.37
PRAMEF25A6NGN4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEF25A6NGN4 KRT8P3-201ENST00000519669 1449 ntBASIC17.33■□□□□ 0.36
PRAMEF25A6NGN4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF25A6NGN4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF25A6NGN4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.33■□□□□ 0.36
PRAMEF25A6NGN4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.33■□□□□ 0.36
PRAMEF25A6NGN4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF25A6NGN4 AC012306.2-201ENST00000609350 630 ntBASIC17.33■□□□□ 0.36
PRAMEF25A6NGN4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.33■□□□□ 0.36
PRAMEF25A6NGN4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PRAMEF25A6NGN4 AC008764.6-201ENST00000595909 2069 ntBASIC17.33■□□□□ 0.36
PRAMEF25A6NGN4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.33■□□□□ 0.36
PRAMEF25A6NGN4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.33■□□□□ 0.36
PRAMEF25A6NGN4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF25A6NGN4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF25A6NGN4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF25A6NGN4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 AC092338.2-201ENST00000568827 1415 ntBASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 ECEL1P3-201ENST00000427961 737 ntBASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 AL353719.1-201ENST00000566847 864 ntBASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.32■□□□□ 0.36
PRAMEF25A6NGN4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF25A6NGN4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PRAMEF25A6NGN4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PRAMEF25A6NGN4 AL357033.4-201ENST00000617703 1807 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms