Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 AC011467.2-201ENST00000598425 242 ntBASIC21.49■■□□□ 1.03
SSC5DA1L4H1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 AC099343.3-201ENST00000605834 2503 ntBASIC21.49■■□□□ 1.03
SSC5DA1L4H1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 RPS2P1-201ENST00000434010 821 ntBASIC21.48■■□□□ 1.03
SSC5DA1L4H1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 AC025062.2-201ENST00000605477 670 ntBASIC21.48■■□□□ 1.03
SSC5DA1L4H1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 AL158211.5-201ENST00000623583 2518 ntBASIC21.48■■□□□ 1.03
SSC5DA1L4H1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSC5DA1L4H1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.48■■□□□ 1.03
SSC5DA1L4H1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 MED15P5-201ENST00000423150 992 ntBASIC21.47■■□□□ 1.03
SSC5DA1L4H1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 AC010327.4-202ENST00000591484 748 ntBASIC21.47■■□□□ 1.03
SSC5DA1L4H1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 AL356488.2-201ENST00000602755 427 ntBASIC21.47■■□□□ 1.03
SSC5DA1L4H1 AL691403.2-201ENST00000618460 490 ntBASIC21.47■■□□□ 1.03
SSC5DA1L4H1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.47■■□□□ 1.03
SSC5DA1L4H1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 HMGN1P19-201ENST00000436976 333 ntBASIC21.46■■□□□ 1.03
SSC5DA1L4H1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSC5DA1L4H1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms