Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV5A0A0B4J249 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV5A0A0B4J249 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 KRT8P45-201ENST00000414328 1447 ntBASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 AC008556.1-201ENST00000610908 2040 ntBASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms