Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 LINC02228-203ENST00000641970 1355 ntBASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 TERF1P2-201ENST00000583350 1212 ntBASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 MIR6084-201ENST00000622012 110 ntBASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 AL035685.1-201ENST00000636663 812 ntBASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
TRAV13-2A0A0B4J235 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.21□□□□□ -0.46
TRAV13-2A0A0B4J235 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV13-2A0A0B4J235 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV13-2A0A0B4J235 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV13-2A0A0B4J235 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV13-2A0A0B4J235 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
TRAV13-2A0A0B4J235 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV13-2A0A0B4J235 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV13-2A0A0B4J235 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.46
TRAV13-2A0A0B4J235 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.21□□□□□ -0.46
TRAV13-2A0A0B4J235 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.21□□□□□ -0.46
TRAV13-2A0A0B4J235 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV13-2A0A0B4J235 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.21□□□□□ -0.46
TRAV13-2A0A0B4J235 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
TRAV13-2A0A0B4J235 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 AC112777.1-201ENST00000540175 1423 ntBASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 AC080080.1-201ENST00000625121 2420 ntBASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 AL356441.2-201ENST00000443009 864 ntBASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 TERF1P5-201ENST00000477545 1207 ntBASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 HES2-205ENST00000487437 968 ntTSL 3 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV13-2A0A0B4J235 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms