Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 HOXB1-202ENST00000577092 1414 ntBASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.33■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 SDHAP2-201ENST00000455183 2001 ntBASIC16.33■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.33■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AL163051.1-201ENST00000569214 1512 ntBASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC087499.1-201ENST00000418141 1075 ntBASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC128688.1-201ENST00000487626 519 ntBASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms