Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV1A0A0A0MS02 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV1A0A0A0MS02 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.45□□□□□ -0.26
TRGV1A0A0A0MS02 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV1A0A0A0MS02 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV1A0A0A0MS02 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV1A0A0A0MS02 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV1A0A0A0MS02 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV1A0A0A0MS02 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV1A0A0A0MS02 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.45□□□□□ -0.26
TRGV1A0A0A0MS02 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRGV1A0A0A0MS02 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TRGV1A0A0A0MS02 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV1A0A0A0MS02 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 AC090164.3-201ENST00000610780 2143 ntBASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 MTMR9LP-203ENST00000426597 1545 ntBASIC13.44□□□□□ -0.26
TRGV1A0A0A0MS02 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 KRT17P2-201ENST00000300992 1314 ntBASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 MCCD1P1-208ENST00000445732 328 ntBASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 MYC-208ENST00000641036 567 ntBASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 AL357033.4-201ENST00000617703 1807 ntBASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV1A0A0A0MS02 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV1A0A0A0MS02 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms