Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTCH2Q9Y6C5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTCH2Q9Y6C5 METTL21AP1-201ENST00000438852 635 ntBASIC20.84■□□□□ 0.93
PTCH2Q9Y6C5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.84■□□□□ 0.93
PTCH2Q9Y6C5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.84■□□□□ 0.93
PTCH2Q9Y6C5 OR7E14P-202ENST00000530490 1290 ntBASIC20.84■□□□□ 0.93
PTCH2Q9Y6C5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.84■□□□□ 0.93
PTCH2Q9Y6C5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PTCH2Q9Y6C5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PTCH2Q9Y6C5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTCH2Q9Y6C5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTCH2Q9Y6C5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTCH2Q9Y6C5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.84■□□□□ 0.93
PTCH2Q9Y6C5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.83■□□□□ 0.93
PTCH2Q9Y6C5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.83■□□□□ 0.93
PTCH2Q9Y6C5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTCH2Q9Y6C5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.83■□□□□ 0.93
PTCH2Q9Y6C5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PTCH2Q9Y6C5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.83■□□□□ 0.93
PTCH2Q9Y6C5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTCH2Q9Y6C5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTCH2Q9Y6C5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTCH2Q9Y6C5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.83■□□□□ 0.93
PTCH2Q9Y6C5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.83■□□□□ 0.93
PTCH2Q9Y6C5 RNA5SP416-201ENST00000516838 111 ntBASIC20.83■□□□□ 0.93
PTCH2Q9Y6C5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.83■□□□□ 0.93
PTCH2Q9Y6C5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTCH2Q9Y6C5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTCH2Q9Y6C5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PTCH2Q9Y6C5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
PTCH2Q9Y6C5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
PTCH2Q9Y6C5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.83■□□□□ 0.92
PTCH2Q9Y6C5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PTCH2Q9Y6C5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PTCH2Q9Y6C5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 KRT8P32-201ENST00000512863 1461 ntBASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 AC112777.1-201ENST00000540175 1423 ntBASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 AC007967.2-201ENST00000432613 625 ntBASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 CYMP-203ENST00000474680 1263 ntBASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 TCF3P1-201ENST00000423021 1937 ntBASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.82■□□□□ 0.92
PTCH2Q9Y6C5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTCH2Q9Y6C5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
PTCH2Q9Y6C5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCH2Q9Y6C5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCH2Q9Y6C5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.81■□□□□ 0.92
PTCH2Q9Y6C5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCH2Q9Y6C5 AC023274.1-201ENST00000418278 595 ntBASIC20.81■□□□□ 0.92
PTCH2Q9Y6C5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.81■□□□□ 0.92
PTCH2Q9Y6C5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.81■□□□□ 0.92
PTCH2Q9Y6C5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.81■□□□□ 0.92
PTCH2Q9Y6C5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.81■□□□□ 0.92
PTCH2Q9Y6C5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.81■□□□□ 0.92
PTCH2Q9Y6C5 AC002347.1-201ENST00000569543 541 ntBASIC20.81■□□□□ 0.92
PTCH2Q9Y6C5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.81■□□□□ 0.92
PTCH2Q9Y6C5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTCH2Q9Y6C5 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.81■□□□□ 0.92
PTCH2Q9Y6C5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.81■□□□□ 0.92
PTCH2Q9Y6C5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 AC211486.1-202ENST00000416371 468 ntBASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 AC211476.1-201ENST00000503899 468 ntBASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 AL596442.2-201ENST00000610240 980 ntBASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCH2Q9Y6C5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms