Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 FAM197Y8-203ENST00000450145 560 ntBASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 MIR5100-201ENST00000579544 119 ntBASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 IL9RP2-201ENST00000423948 1312 ntBASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC2Q9Y5I4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHAC2Q9Y5I4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHAC2Q9Y5I4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHAC2Q9Y5I4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHAC2Q9Y5I4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
PCDHAC2Q9Y5I4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHAC2Q9Y5I4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHAC2Q9Y5I4 VENTXP7-201ENST00000475503 772 ntBASIC21.96■■□□□ 1.11
PCDHAC2Q9Y5I4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.96■■□□□ 1.11
PCDHAC2Q9Y5I4 AC005336.2-201ENST00000593183 939 ntBASIC21.96■■□□□ 1.11
PCDHAC2Q9Y5I4 AL049840.3-201ENST00000602669 611 ntBASIC21.96■■□□□ 1.11
PCDHAC2Q9Y5I4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHAC2Q9Y5I4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PCDHAC2Q9Y5I4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHAC2Q9Y5I4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.95■■□□□ 1.11
PCDHAC2Q9Y5I4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
PCDHAC2Q9Y5I4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 MIR574-201ENST00000385209 96 ntBASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 AC096582.2-201ENST00000510860 516 ntBASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHAC2Q9Y5I4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 AC132008.2-207ENST00000454517 770 ntBASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 KRT18P41-201ENST00000518924 1277 ntBASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 AP001005.1-201ENST00000571755 1248 ntBASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 AL591684.3-201ENST00000605187 298 ntBASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC2Q9Y5I4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHAC2Q9Y5I4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHAC2Q9Y5I4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHAC2Q9Y5I4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.93■■□□□ 1.1
PCDHAC2Q9Y5I4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHAC2Q9Y5I4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms