Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 ABALON-201ENST00000629058 1903 ntBASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB3Q9Y5G1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB3Q9Y5G1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB3Q9Y5G1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB3Q9Y5G1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB3Q9Y5G1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB3Q9Y5G1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PCDHGB3Q9Y5G1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB3Q9Y5G1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB3Q9Y5G1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDHGB3Q9Y5G1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDHGB3Q9Y5G1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB3Q9Y5G1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
PCDHGB3Q9Y5G1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 AC073592.3-201ENST00000625118 1834 ntBASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 AC068880.1-201ENST00000507289 2297 ntBASIC17.58■□□□□ 0.4
PCDHGB3Q9Y5G1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 KRT8P3-201ENST00000519669 1449 ntBASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 B3GAT3P1-201ENST00000471720 806 ntBASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGB3Q9Y5G1 CKBP1-201ENST00000565489 1086 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms