Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 NEFHP1-201ENST00000412845 2629 ntBASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 AL109659.2-201ENST00000606809 1674 ntBASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 AL450487.1-201ENST00000426799 995 ntBASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 AC005332.1-201ENST00000577698 1310 ntBASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB11Q9Y5F2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 HEIH-201ENST00000623091 1652 ntBASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 MIR4674-201ENST00000582457 87 ntBASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 AL691432.3-201ENST00000621860 400 ntBASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 AC093525.10-201ENST00000625130 1569 ntBASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHB11Q9Y5F2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 AC116407.4-201ENST00000623319 1061 ntBASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 AL031598.1-201ENST00000561511 1773 ntBASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHB11Q9Y5F2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDHB11Q9Y5F2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms