Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
YIPF1Q9Y548 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.31■□□□□ 0.68
YIPF1Q9Y548 AC124864.1-201ENST00000623408 392 ntBASIC19.31■□□□□ 0.68
YIPF1Q9Y548 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
YIPF1Q9Y548 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
YIPF1Q9Y548 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
YIPF1Q9Y548 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
YIPF1Q9Y548 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 AC246785.2-201ENST00000432512 513 ntBASIC19.3■□□□□ 0.68
YIPF1Q9Y548 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 Z69720.1-201ENST00000601483 472 ntBASIC19.3■□□□□ 0.68
YIPF1Q9Y548 AC138894.3-201ENST00000603787 634 ntBASIC19.3■□□□□ 0.68
YIPF1Q9Y548 AC004263.2-201ENST00000617183 678 ntBASIC19.3■□□□□ 0.68
YIPF1Q9Y548 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.3■□□□□ 0.68
YIPF1Q9Y548 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF1Q9Y548 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF1Q9Y548 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.29■□□□□ 0.68
YIPF1Q9Y548 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF1Q9Y548 AC009102.3-201ENST00000623118 1491 ntBASIC19.29■□□□□ 0.68
YIPF1Q9Y548 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF1Q9Y548 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF1Q9Y548 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.29■□□□□ 0.68
YIPF1Q9Y548 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF1Q9Y548 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.29■□□□□ 0.68
YIPF1Q9Y548 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF1Q9Y548 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
YIPF1Q9Y548 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.29■□□□□ 0.68
YIPF1Q9Y548 AC091304.2-201ENST00000564639 760 ntBASIC19.29■□□□□ 0.68
YIPF1Q9Y548 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
YIPF1Q9Y548 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.29■□□□□ 0.68
YIPF1Q9Y548 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF1Q9Y548 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF1Q9Y548 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF1Q9Y548 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 FAAHP1-202ENST00000446499 1238 ntBASIC19.28■□□□□ 0.68
YIPF1Q9Y548 KRT17P6-201ENST00000453795 1220 ntBASIC19.28■□□□□ 0.68
YIPF1Q9Y548 KRT18P31-201ENST00000506277 1292 ntBASIC19.28■□□□□ 0.68
YIPF1Q9Y548 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.28■□□□□ 0.68
YIPF1Q9Y548 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 AC099343.3-201ENST00000605834 2503 ntBASIC19.28■□□□□ 0.68
YIPF1Q9Y548 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF1Q9Y548 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
YIPF1Q9Y548 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
YIPF1Q9Y548 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
YIPF1Q9Y548 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
YIPF1Q9Y548 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms