Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.57■□□□□ 0.56
PKP3Q9Y446 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PKP3Q9Y446 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
PKP3Q9Y446 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.57■□□□□ 0.56
PKP3Q9Y446 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.57■□□□□ 0.56
PKP3Q9Y446 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.57■□□□□ 0.56
PKP3Q9Y446 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 AC113347.1-201ENST00000413321 391 ntBASIC18.57■□□□□ 0.56
PKP3Q9Y446 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PKP3Q9Y446 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 AL137013.1-201ENST00000432946 1228 ntBASIC18.57■□□□□ 0.56
PKP3Q9Y446 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.57■□□□□ 0.56
PKP3Q9Y446 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.57■□□□□ 0.56
PKP3Q9Y446 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.57■□□□□ 0.56
PKP3Q9Y446 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.57■□□□□ 0.56
PKP3Q9Y446 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.57■□□□□ 0.56
PKP3Q9Y446 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.57■□□□□ 0.56
PKP3Q9Y446 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PKP3Q9Y446 AC112497.1-201ENST00000624824 639 ntBASIC18.57■□□□□ 0.56
PKP3Q9Y446 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PKP3Q9Y446 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PKP3Q9Y446 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PKP3Q9Y446 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PKP3Q9Y446 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.56■□□□□ 0.56
PKP3Q9Y446 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.56■□□□□ 0.56
PKP3Q9Y446 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PKP3Q9Y446 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 MYLKP1-201ENST00000509077 1580 ntBASIC18.56■□□□□ 0.56
PKP3Q9Y446 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.56■□□□□ 0.56
PKP3Q9Y446 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.56■□□□□ 0.56
PKP3Q9Y446 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.56■□□□□ 0.56
PKP3Q9Y446 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PKP3Q9Y446 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PKP3Q9Y446 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.56■□□□□ 0.56
PKP3Q9Y446 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
PKP3Q9Y446 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.56■□□□□ 0.56
PKP3Q9Y446 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.56■□□□□ 0.56
PKP3Q9Y446 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.56■□□□□ 0.56
PKP3Q9Y446 NEK4P2-201ENST00000580004 1012 ntBASIC18.56■□□□□ 0.56
PKP3Q9Y446 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.56■□□□□ 0.56
PKP3Q9Y446 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.56■□□□□ 0.56
PKP3Q9Y446 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
PKP3Q9Y446 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PKP3Q9Y446 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PKP3Q9Y446 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP3Q9Y446 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.55■□□□□ 0.56
PKP3Q9Y446 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP3Q9Y446 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP3Q9Y446 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PKP3Q9Y446 AC126763.1-201ENST00000552015 2118 ntBASIC18.55■□□□□ 0.56
PKP3Q9Y446 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP3Q9Y446 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP3Q9Y446 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PKP3Q9Y446 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PKP3Q9Y446 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.55■□□□□ 0.56
PKP3Q9Y446 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.55■□□□□ 0.56
PKP3Q9Y446 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.55■□□□□ 0.56
PKP3Q9Y446 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.55■□□□□ 0.56
PKP3Q9Y446 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.55■□□□□ 0.56
PKP3Q9Y446 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.55■□□□□ 0.56
PKP3Q9Y446 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.55■□□□□ 0.56
PKP3Q9Y446 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.55■□□□□ 0.56
PKP3Q9Y446 AC141257.4-201ENST00000634557 245 ntBASIC18.55■□□□□ 0.56
PKP3Q9Y446 AC136944.6-201ENST00000634818 245 ntBASIC18.55■□□□□ 0.56
PKP3Q9Y446 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PKP3Q9Y446 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PKP3Q9Y446 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PKP3Q9Y446 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms