Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RNF11Q9Y3C5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF11Q9Y3C5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF11Q9Y3C5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF11Q9Y3C5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNF11Q9Y3C5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF11Q9Y3C5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 AC008556.1-201ENST00000610908 2040 ntBASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF11Q9Y3C5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 AL355355.2-201ENST00000442321 338 ntBASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF11Q9Y3C5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 AL109659.2-201ENST00000606809 1674 ntBASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 CRYGFP-201ENST00000418459 633 ntBASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 AC026471.5-201ENST00000615068 467 ntBASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 AC099398.1-201ENST00000567919 2776 ntBASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
RNF11Q9Y3C5 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF11Q9Y3C5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms