Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.36■□□□□ 0.37
IFT52Q9Y366 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFT52Q9Y366 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.36■□□□□ 0.37
IFT52Q9Y366 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.35■□□□□ 0.37
IFT52Q9Y366 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
IFT52Q9Y366 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
IFT52Q9Y366 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
IFT52Q9Y366 KRT18P29-201ENST00000397031 1267 ntBASIC17.35■□□□□ 0.37
IFT52Q9Y366 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.35■□□□□ 0.37
IFT52Q9Y366 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.35■□□□□ 0.37
IFT52Q9Y366 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
IFT52Q9Y366 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.35■□□□□ 0.37
IFT52Q9Y366 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 MTMR9LP-203ENST00000426597 1545 ntBASIC17.35■□□□□ 0.37
IFT52Q9Y366 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
IFT52Q9Y366 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.35■□□□□ 0.37
IFT52Q9Y366 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
IFT52Q9Y366 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.35■□□□□ 0.37
IFT52Q9Y366 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IFT52Q9Y366 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
IFT52Q9Y366 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT52Q9Y366 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.34■□□□□ 0.37
IFT52Q9Y366 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT52Q9Y366 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.34■□□□□ 0.37
IFT52Q9Y366 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT52Q9Y366 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT52Q9Y366 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT52Q9Y366 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
IFT52Q9Y366 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IFT52Q9Y366 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT52Q9Y366 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.34■□□□□ 0.37
IFT52Q9Y366 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IFT52Q9Y366 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
IFT52Q9Y366 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.34■□□□□ 0.37
IFT52Q9Y366 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.34■□□□□ 0.37
IFT52Q9Y366 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IFT52Q9Y366 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IFT52Q9Y366 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.34■□□□□ 0.37
IFT52Q9Y366 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
IFT52Q9Y366 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.34■□□□□ 0.37
IFT52Q9Y366 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.34■□□□□ 0.37
IFT52Q9Y366 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
IFT52Q9Y366 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT52Q9Y366 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.34■□□□□ 0.37
IFT52Q9Y366 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.34■□□□□ 0.37
IFT52Q9Y366 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
IFT52Q9Y366 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
IFT52Q9Y366 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.34■□□□□ 0.37
IFT52Q9Y366 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT52Q9Y366 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFT52Q9Y366 AC124067.4-201ENST00000519691 2379 ntBASIC17.33■□□□□ 0.37
IFT52Q9Y366 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.33■□□□□ 0.37
IFT52Q9Y366 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFT52Q9Y366 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
IFT52Q9Y366 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFT52Q9Y366 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFT52Q9Y366 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.33■□□□□ 0.36
IFT52Q9Y366 AC112777.1-201ENST00000540175 1423 ntBASIC17.33■□□□□ 0.36
IFT52Q9Y366 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFT52Q9Y366 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.33■□□□□ 0.36
IFT52Q9Y366 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.33■□□□□ 0.36
IFT52Q9Y366 B3GAT3P1-201ENST00000471720 806 ntBASIC17.33■□□□□ 0.36
IFT52Q9Y366 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.33■□□□□ 0.36
IFT52Q9Y366 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.33■□□□□ 0.36
IFT52Q9Y366 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IFT52Q9Y366 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.33■□□□□ 0.36
IFT52Q9Y366 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFT52Q9Y366 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFT52Q9Y366 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFT52Q9Y366 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFT52Q9Y366 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IFT52Q9Y366 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFT52Q9Y366 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFT52Q9Y366 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IFT52Q9Y366 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IFT52Q9Y366 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFT52Q9Y366 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IFT52Q9Y366 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.33■□□□□ 0.36
IFT52Q9Y366 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.32■□□□□ 0.36
IFT52Q9Y366 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IFT52Q9Y366 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms