Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 AK4P3-201ENST00000418260 669 ntBASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 AC117947.1-201ENST00000427448 529 ntBASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 AL109659.2-201ENST00000606809 1674 ntBASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RPH3AQ9Y2J0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.96■□□□□ 0.31
RPH3AQ9Y2J0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
RPH3AQ9Y2J0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RPH3AQ9Y2J0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RPH3AQ9Y2J0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RPH3AQ9Y2J0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.96■□□□□ 0.3
RPH3AQ9Y2J0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RPH3AQ9Y2J0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 YBX1P2-201ENST00000489612 999 ntBASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 AL121894.2-201ENST00000602977 491 ntBASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 AC068587.9-201ENST00000641814 219 ntBASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPH3AQ9Y2J0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 HEIH-201ENST00000623091 1652 ntBASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms