Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF6Q9Y252 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF6Q9Y252 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF6Q9Y252 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF6Q9Y252 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF6Q9Y252 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF6Q9Y252 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.44■□□□□ 0.38
RNF6Q9Y252 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF6Q9Y252 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
RNF6Q9Y252 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RNF6Q9Y252 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF6Q9Y252 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF6Q9Y252 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF6Q9Y252 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF6Q9Y252 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF6Q9Y252 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF6Q9Y252 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF6Q9Y252 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RNF6Q9Y252 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF6Q9Y252 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF6Q9Y252 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
RNF6Q9Y252 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF6Q9Y252 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RNF6Q9Y252 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF6Q9Y252 AL445675.2-201ENST00000620291 557 ntBASIC17.44■□□□□ 0.38
RNF6Q9Y252 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
RNF6Q9Y252 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF6Q9Y252 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF6Q9Y252 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF6Q9Y252 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF6Q9Y252 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF6Q9Y252 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF6Q9Y252 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF6Q9Y252 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RNF6Q9Y252 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF6Q9Y252 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF6Q9Y252 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF6Q9Y252 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF6Q9Y252 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
RNF6Q9Y252 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 MESTP1-201ENST00000404287 994 ntBASIC17.43■□□□□ 0.38
RNF6Q9Y252 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF6Q9Y252 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF6Q9Y252 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RNF6Q9Y252 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF6Q9Y252 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF6Q9Y252 AC026271.3-201ENST00000571884 352 ntBASIC17.43■□□□□ 0.38
RNF6Q9Y252 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF6Q9Y252 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF6Q9Y252 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.43■□□□□ 0.38
RNF6Q9Y252 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.43■□□□□ 0.38
RNF6Q9Y252 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF6Q9Y252 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 AC073508.3-201ENST00000619697 1419 ntBASIC17.43■□□□□ 0.38
RNF6Q9Y252 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RNF6Q9Y252 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RNF6Q9Y252 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF6Q9Y252 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF6Q9Y252 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF6Q9Y252 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF6Q9Y252 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF6Q9Y252 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF6Q9Y252 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF6Q9Y252 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF6Q9Y252 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF6Q9Y252 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF6Q9Y252 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF6Q9Y252 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.42■□□□□ 0.38
RNF6Q9Y252 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF6Q9Y252 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.42■□□□□ 0.38
RNF6Q9Y252 YBX1P10-201ENST00000444752 975 ntBASIC17.42■□□□□ 0.38
RNF6Q9Y252 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF6Q9Y252 C2orf69P3-201ENST00000565542 1120 ntBASIC17.42■□□□□ 0.38
RNF6Q9Y252 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RNF6Q9Y252 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF6Q9Y252 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF6Q9Y252 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF6Q9Y252 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.42■□□□□ 0.38
RNF6Q9Y252 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF6Q9Y252 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF6Q9Y252 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
RNF6Q9Y252 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF6Q9Y252 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF6Q9Y252 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms