Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB4Q9UN71 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 ABALON-201ENST00000629058 1903 ntBASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 AL023875.1-201ENST00000640777 796 ntBASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGB4Q9UN71 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHGB4Q9UN71 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
PCDHGB4Q9UN71 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHGB4Q9UN71 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 AC008764.6-201ENST00000595909 2069 ntBASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 KRASP1-201ENST00000407852 552 ntBASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 KRT16P5-201ENST00000455284 522 ntBASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 AC083906.6-201ENST00000641366 219 ntBASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB4Q9UN71 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 TSPY23P-201ENST00000440136 739 ntBASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB4Q9UN71 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB4Q9UN71 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB4Q9UN71 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGB4Q9UN71 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGB4Q9UN71 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGB4Q9UN71 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGB4Q9UN71 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB4Q9UN71 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGB4Q9UN71 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB4Q9UN71 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB4Q9UN71 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms