Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MIR564-202ENST00000385049 94 ntBASIC19.28■□□□□ 0.68
PPARGC1AQ9UBK2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.28■□□□□ 0.68
PPARGC1AQ9UBK2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PPARGC1AQ9UBK2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PPARGC1AQ9UBK2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.28■□□□□ 0.68
PPARGC1AQ9UBK2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PPARGC1AQ9UBK2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
PPARGC1AQ9UBK2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PPARGC1AQ9UBK2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PPARGC1AQ9UBK2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PPARGC1AQ9UBK2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.28■□□□□ 0.68
PPARGC1AQ9UBK2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PPARGC1AQ9UBK2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PPARGC1AQ9UBK2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PPARGC1AQ9UBK2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PPARGC1AQ9UBK2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PPARGC1AQ9UBK2 CROCCP3-202ENST00000420820 1947 ntBASIC19.27■□□□□ 0.68
PPARGC1AQ9UBK2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PPARGC1AQ9UBK2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PPARGC1AQ9UBK2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PPARGC1AQ9UBK2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PPARGC1AQ9UBK2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PPARGC1AQ9UBK2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.27■□□□□ 0.68
PPARGC1AQ9UBK2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PPARGC1AQ9UBK2 NEK4P2-201ENST00000580004 1012 ntBASIC19.27■□□□□ 0.68
PPARGC1AQ9UBK2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PPARGC1AQ9UBK2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.27■□□□□ 0.68
PPARGC1AQ9UBK2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PPARGC1AQ9UBK2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.27■□□□□ 0.68
PPARGC1AQ9UBK2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.27■□□□□ 0.68
PPARGC1AQ9UBK2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.27■□□□□ 0.68
PPARGC1AQ9UBK2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PPARGC1AQ9UBK2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
PPARGC1AQ9UBK2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PPARGC1AQ9UBK2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PPARGC1AQ9UBK2 AC036111.1-201ENST00000533973 1582 ntBASIC19.27■□□□□ 0.67
PPARGC1AQ9UBK2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PPARGC1AQ9UBK2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PPARGC1AQ9UBK2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PPARGC1AQ9UBK2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 ATP5G1P1-201ENST00000448724 379 ntBASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 AC141257.4-201ENST00000634557 245 ntBASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 AC136944.6-201ENST00000634818 245 ntBASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 AC092865.7-201ENST00000641832 219 ntBASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPARGC1AQ9UBK2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 AL357033.4-201ENST00000617703 1807 ntBASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 AC005332.8-201ENST00000622750 2735 ntBASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 RCN1P1-201ENST00000400413 996 ntBASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 AC104581.1-202ENST00000635932 2618 ntBASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.25■□□□□ 0.67
PPARGC1AQ9UBK2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PPARGC1AQ9UBK2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms