Protein–RNA interactions for Protein: Q9NX36

DNAJC28, DnaJ homolog subfamily C member 28, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJC28Q9NX36 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAJC28Q9NX36 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 AC104417.2-201ENST00000562989 1793 ntBASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 AC091076.1-201ENST00000610741 619 ntBASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 MYC-208ENST00000641036 567 ntBASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 SDHAP1-207ENST00000440850 2000 ntBASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 AL133373.2-201ENST00000623187 2828 ntBASIC18.78■□□□□ 0.6
DNAJC28Q9NX36 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 PCDHB18P-201ENST00000524813 2368 ntBASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 AL031133.1-201ENST00000406807 723 ntBASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 HOMER2P1-201ENST00000455653 964 ntBASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 AL359075.1-203ENST00000462729 1002 ntBASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DNAJC28Q9NX36 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
DNAJC28Q9NX36 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DNAJC28Q9NX36 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
DNAJC28Q9NX36 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DNAJC28Q9NX36 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
DNAJC28Q9NX36 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.77■□□□□ 0.59
DNAJC28Q9NX36 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 UPK3BP1-201ENST00000428678 509 ntBASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 AL441883.1-201ENST00000566170 1045 ntBASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNAJC28Q9NX36 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms