Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 AL161938.1-201ENST00000569833 2180 ntBASIC17.17■□□□□ 0.34
HPF1Q9NWY4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 MYC-208ENST00000641036 567 ntBASIC17.17■□□□□ 0.34
HPF1Q9NWY4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 KRT8P7-201ENST00000533003 1432 ntBASIC17.16■□□□□ 0.34
HPF1Q9NWY4 MIR564-202ENST00000385049 94 ntBASIC17.16■□□□□ 0.34
HPF1Q9NWY4 AL031133.1-201ENST00000406807 723 ntBASIC17.16■□□□□ 0.34
HPF1Q9NWY4 KRT18P23-201ENST00000435622 1283 ntBASIC17.16■□□□□ 0.34
HPF1Q9NWY4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 KRT18P38-201ENST00000449496 1282 ntBASIC17.16■□□□□ 0.34
HPF1Q9NWY4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.16■□□□□ 0.34
HPF1Q9NWY4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HPF1Q9NWY4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 AC112907.2-201ENST00000448639 330 ntBASIC17.15■□□□□ 0.34
HPF1Q9NWY4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 AC068587.9-201ENST00000641814 219 ntBASIC17.15■□□□□ 0.34
HPF1Q9NWY4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPF1Q9NWY4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
HPF1Q9NWY4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
HPF1Q9NWY4 AC034236.2-201ENST00000606662 1610 ntBASIC17.14■□□□□ 0.33
HPF1Q9NWY4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms