Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 AL137784.2-201ENST00000607332 1000 ntBASIC16.84■□□□□ 0.29
HMG20AQ9NP66 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 PHGDH-210ENST00000641115 1638 ntBASIC16.84■□□□□ 0.29
HMG20AQ9NP66 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMG20AQ9NP66 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
HMG20AQ9NP66 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HMG20AQ9NP66 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HMG20AQ9NP66 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
HMG20AQ9NP66 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 MIR935-201ENST00000401179 91 ntBASIC16.83■□□□□ 0.28
HMG20AQ9NP66 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 CDCA4P2-201ENST00000441182 718 ntBASIC16.83■□□□□ 0.28
HMG20AQ9NP66 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 AC023632.3-201ENST00000521633 145 ntBASIC16.83■□□□□ 0.28
HMG20AQ9NP66 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20AQ9NP66 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 LSM12P1-201ENST00000411836 588 ntBASIC16.82■□□□□ 0.28
HMG20AQ9NP66 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 AC026185.1-201ENST00000445748 174 ntBASIC16.82■□□□□ 0.28
HMG20AQ9NP66 AC083906.6-201ENST00000641366 219 ntBASIC16.82■□□□□ 0.28
HMG20AQ9NP66 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 AL162727.3-201ENST00000635661 2787 ntBASIC16.82■□□□□ 0.28
HMG20AQ9NP66 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20AQ9NP66 NFIC-211ENST00000641145 8399 ntBASIC16.81■□□□□ 0.28
HMG20AQ9NP66 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms