Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 AC091076.1-201ENST00000610741 619 ntBASIC17.58■□□□□ 0.4
ZNF304Q9HCX3 AL358472.4-201ENST00000633140 710 ntBASIC17.58■□□□□ 0.4
ZNF304Q9HCX3 AC083906.6-201ENST00000641366 219 ntBASIC17.58■□□□□ 0.4
ZNF304Q9HCX3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF304Q9HCX3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
ZNF304Q9HCX3 AL357033.4-201ENST00000617703 1807 ntBASIC17.58■□□□□ 0.4
ZNF304Q9HCX3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF304Q9HCX3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.58■□□□□ 0.4
ZNF304Q9HCX3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF304Q9HCX3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 FAM86EP-206ENST00000510506 987 ntBASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 ZNF444P1-201ENST00000559497 298 ntBASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 MIR3917-201ENST00000580971 93 ntBASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 Z98044.1-201ENST00000632503 1764 ntBASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF304Q9HCX3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 AC010240.3-201ENST00000607688 395 ntBASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 HYMAI.1-201ENST00000620949 238 ntBASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 AL157888.1-201ENST00000631930 593 ntBASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 MTMR9LP-203ENST00000426597 1545 ntBASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF304Q9HCX3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 PCED1CP-201ENST00000419887 785 ntBASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms