Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC068880.1-201ENST00000507289 2297 ntBASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 AL023284.2-201ENST00000405850 579 ntBASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 SLC25A1P4-201ENST00000567977 778 ntBASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 DGCR10-201ENST00000609839 495 ntBASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 MIR564-202ENST00000385049 94 ntBASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 MFAP1P1-201ENST00000442257 1255 ntBASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 MCCD1P1-208ENST00000445732 328 ntBASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 NUDT16P1-203ENST00000513809 620 ntBASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM1Q9HBL6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 AC093677.2-201ENST00000600169 1863 ntBASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 PRORSD1P-201ENST00000295112 541 ntBASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 AC116562.2-201ENST00000507042 360 ntBASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 AC142381.4-202ENST00000563973 229 ntBASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 GPAT2P1-201ENST00000444924 1672 ntBASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
LRTM1Q9HBL6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.79■□□□□ 0.44
LRTM1Q9HBL6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms