Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 AL121894.2-201ENST00000602977 491 ntBASIC19.96■□□□□ 0.79
NXF3Q9H4D5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 KRT18P1-202ENST00000452408 1331 ntBASIC19.96■□□□□ 0.79
NXF3Q9H4D5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NXF3Q9H4D5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 MIR149-201ENST00000384879 89 ntBASIC19.95■□□□□ 0.78
NXF3Q9H4D5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.95■□□□□ 0.78
NXF3Q9H4D5 MYLKP1-201ENST00000509077 1580 ntBASIC19.95■□□□□ 0.78
NXF3Q9H4D5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.94■□□□□ 0.78
NXF3Q9H4D5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NXF3Q9H4D5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
NXF3Q9H4D5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.94■□□□□ 0.78
NXF3Q9H4D5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.94■□□□□ 0.78
NXF3Q9H4D5 AL450487.1-201ENST00000426799 995 ntBASIC19.94■□□□□ 0.78
NXF3Q9H4D5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.94■□□□□ 0.78
NXF3Q9H4D5 TPSP2-201ENST00000561760 610 ntBASIC19.94■□□□□ 0.78
NXF3Q9H4D5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.94■□□□□ 0.78
NXF3Q9H4D5 MIR3652-201ENST00000579335 131 ntBASIC19.94■□□□□ 0.78
NXF3Q9H4D5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NXF3Q9H4D5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NXF3Q9H4D5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
NXF3Q9H4D5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NXF3Q9H4D5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NXF3Q9H4D5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NXF3Q9H4D5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NXF3Q9H4D5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NXF3Q9H4D5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 AC009102.3-201ENST00000623118 1491 ntBASIC19.93■□□□□ 0.78
NXF3Q9H4D5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
NXF3Q9H4D5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 AC005082.1-201ENST00000413042 2259 ntBASIC19.92■□□□□ 0.78
NXF3Q9H4D5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms