Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 AC009113.1-201ENST00000570267 2443 ntBASIC18.57■□□□□ 0.56
CCDC68Q9H2F9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 AL357033.4-201ENST00000617703 1807 ntBASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 UNC93B2-201ENST00000285383 730 ntBASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 CA15P1-201ENST00000481698 905 ntBASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 AC112777.1-201ENST00000540175 1423 ntBASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC68Q9H2F9 LTB4R2-202ENST00000528054 3092 ntBASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC68Q9H2F9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms