Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 TSPY23P-201ENST00000440136 739 ntBASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 YBX1P10-201ENST00000444752 975 ntBASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 AL136967.2-201ENST00000623968 743 ntBASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 AL513477.1-201ENST00000602865 2407 ntBASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLIRPQ9GZT3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 PCDHA14-201ENST00000506751 2298 ntBASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 PBX2P1-201ENST00000493219 1291 ntBASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 AC106886.4-201ENST00000623557 2502 ntBASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLIRPQ9GZT3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms