Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 LINC01165-201ENST00000445190 1623 ntBASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 KCTD21-AS1-201ENST00000500113 1789 ntTSL 2 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 SPP1-201ENST00000237623 1581 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 MTCO1P46-201ENST00000451639 1491 ntBASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 AC012508.2-201ENST00000567613 1472 ntBASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 MTND4P12-201ENST00000498999 1377 ntBASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 PTGR2-203ENST00000553813 1351 ntTSL 5 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 TTTY11-201ENST00000253470 837 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 TPT1P10-201ENST00000312966 496 ntBASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 RNU6-623P-201ENST00000363143 105 ntBASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 FAM209B-201ENST00000371325 694 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 Y_RNA.436-201ENST00000384097 102 ntBASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 RN7SKP42-201ENST00000410913 300 ntBASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 CDY6P-201ENST00000413320 1266 ntBASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 CDY17P-201ENST00000414121 1282 ntBASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 MTND1P23-201ENST00000416931 372 ntBASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 AL606495.1-201ENST00000422100 813 ntBASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 CDY8P-201ENST00000428380 1279 ntBASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 AC097381.1-201ENST00000429019 1296 ntBASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 BMP6P1-201ENST00000431230 679 ntBASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 AC084809.1-201ENST00000435733 591 ntTSL 2 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 KRT18P5-201ENST00000436075 1291 ntBASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 AL672032.1-201ENST00000440614 938 ntTSL 3 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 AL606469.1-201ENST00000443224 892 ntTSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms