Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.16■□□□□ 0.98
PTPN18Q99952 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.16■□□□□ 0.98
PTPN18Q99952 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.16■□□□□ 0.98
PTPN18Q99952 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.16■□□□□ 0.98
PTPN18Q99952 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PTPN18Q99952 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.16■□□□□ 0.98
PTPN18Q99952 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN18Q99952 LINC01006-201ENST00000333319 2292 ntBASIC21.16■□□□□ 0.98
PTPN18Q99952 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN18Q99952 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN18Q99952 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN18Q99952 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN18Q99952 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN18Q99952 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PTPN18Q99952 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN18Q99952 HLA-J-201ENST00000462773 1622 ntBASIC21.15■□□□□ 0.98
PTPN18Q99952 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PTPN18Q99952 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN18Q99952 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN18Q99952 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.15■□□□□ 0.98
PTPN18Q99952 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN18Q99952 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN18Q99952 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN18Q99952 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN18Q99952 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.15■□□□□ 0.98
PTPN18Q99952 AC113404.2-201ENST00000507884 177 ntBASIC21.15■□□□□ 0.98
PTPN18Q99952 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.15■□□□□ 0.98
PTPN18Q99952 AC009533.2-201ENST00000543664 586 ntBASIC21.15■□□□□ 0.98
PTPN18Q99952 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC21.15■□□□□ 0.98
PTPN18Q99952 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.15■□□□□ 0.98
PTPN18Q99952 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
PTPN18Q99952 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
PTPN18Q99952 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN18Q99952 AL138831.2-201ENST00000606564 490 ntBASIC21.15■□□□□ 0.98
PTPN18Q99952 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.15■□□□□ 0.98
PTPN18Q99952 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN18Q99952 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.15■□□□□ 0.98
PTPN18Q99952 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.15■□□□□ 0.98
PTPN18Q99952 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PTPN18Q99952 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN18Q99952 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTPN18Q99952 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.14■□□□□ 0.98
PTPN18Q99952 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTPN18Q99952 FP475955.4-201ENST00000623131 1990 ntBASIC21.14■□□□□ 0.98
PTPN18Q99952 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTPN18Q99952 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN18Q99952 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN18Q99952 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC21.14■□□□□ 0.97
PTPN18Q99952 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN18Q99952 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.14■□□□□ 0.97
PTPN18Q99952 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.14■□□□□ 0.97
PTPN18Q99952 AC025062.2-201ENST00000605477 670 ntBASIC21.14■□□□□ 0.97
PTPN18Q99952 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PTPN18Q99952 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN18Q99952 AC134684.3-201ENST00000641758 218 ntBASIC21.14■□□□□ 0.97
PTPN18Q99952 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN18Q99952 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN18Q99952 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.14■□□□□ 0.97
PTPN18Q99952 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN18Q99952 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PTPN18Q99952 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PTPN18Q99952 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.14■□□□□ 0.97
PTPN18Q99952 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN18Q99952 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN18Q99952 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN18Q99952 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN18Q99952 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.13■□□□□ 0.97
PTPN18Q99952 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.13■□□□□ 0.97
PTPN18Q99952 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.13■□□□□ 0.97
PTPN18Q99952 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.13■□□□□ 0.97
PTPN18Q99952 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
PTPN18Q99952 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN18Q99952 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN18Q99952 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.13■□□□□ 0.97
PTPN18Q99952 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN18Q99952 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.13■□□□□ 0.97
PTPN18Q99952 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PTPN18Q99952 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC21.13■□□□□ 0.97
PTPN18Q99952 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC21.13■□□□□ 0.97
PTPN18Q99952 AC004967.1-201ENST00000453589 447 ntBASIC21.13■□□□□ 0.97
PTPN18Q99952 OR7E14P-202ENST00000530490 1290 ntBASIC21.13■□□□□ 0.97
PTPN18Q99952 AC011467.2-201ENST00000598425 242 ntBASIC21.13■□□□□ 0.97
PTPN18Q99952 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.13■□□□□ 0.97
PTPN18Q99952 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.13■□□□□ 0.97
PTPN18Q99952 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PTPN18Q99952 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PTPN18Q99952 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.13■□□□□ 0.97
PTPN18Q99952 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.13■□□□□ 0.97
PTPN18Q99952 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN18Q99952 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN18Q99952 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.13■□□□□ 0.97
PTPN18Q99952 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN18Q99952 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN18Q99952 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
PTPN18Q99952 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN18Q99952 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN18Q99952 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN18Q99952 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN18Q99952 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.12■□□□□ 0.97
PTPN18Q99952 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms