Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
ABCA3Q99758 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC24.57■■□□□ 1.52
ABCA3Q99758 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
ABCA3Q99758 AL356309.3-201ENST00000624132 1934 ntBASIC24.57■■□□□ 1.52
ABCA3Q99758 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC24.57■■□□□ 1.52
ABCA3Q99758 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ABCA3Q99758 CENPM-204ENST00000402420 688 ntTSL 5 BASIC24.57■■□□□ 1.52
ABCA3Q99758 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC24.57■■□□□ 1.52
ABCA3Q99758 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
ABCA3Q99758 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
ABCA3Q99758 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
ABCA3Q99758 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ABCA3Q99758 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC24.56■■□□□ 1.52
ABCA3Q99758 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
ABCA3Q99758 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
ABCA3Q99758 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
ABCA3Q99758 AC125634.1-201ENST00000438758 1403 ntBASIC24.56■■□□□ 1.52
ABCA3Q99758 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC24.56■■□□□ 1.52
ABCA3Q99758 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC24.56■■□□□ 1.52
ABCA3Q99758 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.56■■□□□ 1.52
ABCA3Q99758 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ABCA3Q99758 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
ABCA3Q99758 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ABCA3Q99758 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ABCA3Q99758 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
ABCA3Q99758 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC24.56■■□□□ 1.52
ABCA3Q99758 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
ABCA3Q99758 RPS2P28-201ENST00000314255 741 ntBASIC24.55■■□□□ 1.52
ABCA3Q99758 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
ABCA3Q99758 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC24.55■■□□□ 1.52
ABCA3Q99758 KRT18P27-201ENST00000427733 1299 ntBASIC24.55■■□□□ 1.52
ABCA3Q99758 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
ABCA3Q99758 AC112482.1-201ENST00000492080 688 ntBASIC24.55■■□□□ 1.52
ABCA3Q99758 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC24.55■■□□□ 1.52
ABCA3Q99758 RFPL4AP1-201ENST00000530883 850 ntBASIC24.55■■□□□ 1.52
ABCA3Q99758 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC24.55■■□□□ 1.52
ABCA3Q99758 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
ABCA3Q99758 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
ABCA3Q99758 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC24.55■■□□□ 1.52
ABCA3Q99758 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
ABCA3Q99758 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ABCA3Q99758 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
ABCA3Q99758 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ABCA3Q99758 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ABCA3Q99758 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
ABCA3Q99758 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC24.55■■□□□ 1.52
ABCA3Q99758 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC24.55■■□□□ 1.52
ABCA3Q99758 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC24.55■■□□□ 1.52
ABCA3Q99758 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC24.55■■□□□ 1.52
ABCA3Q99758 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
ABCA3Q99758 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ABCA3Q99758 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ABCA3Q99758 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ABCA3Q99758 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
ABCA3Q99758 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC24.54■■□□□ 1.52
ABCA3Q99758 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ABCA3Q99758 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.54■■□□□ 1.52
ABCA3Q99758 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC24.54■■□□□ 1.52
ABCA3Q99758 AC009947.1-201ENST00000444350 727 ntBASIC24.54■■□□□ 1.52
ABCA3Q99758 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC24.54■■□□□ 1.52
ABCA3Q99758 CFL1-212ENST00000531413 636 ntTSL 3 BASIC24.54■■□□□ 1.52
ABCA3Q99758 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC24.54■■□□□ 1.52
ABCA3Q99758 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
ABCA3Q99758 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ABCA3Q99758 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC24.54■■□□□ 1.52
ABCA3Q99758 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ABCA3Q99758 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.54■■□□□ 1.52
ABCA3Q99758 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ABCA3Q99758 AL163051.1-201ENST00000569214 1512 ntBASIC24.53■■□□□ 1.52
ABCA3Q99758 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC24.53■■□□□ 1.52
ABCA3Q99758 CYMP-203ENST00000474680 1263 ntBASIC24.53■■□□□ 1.52
ABCA3Q99758 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC24.53■■□□□ 1.52
ABCA3Q99758 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC24.53■■□□□ 1.52
ABCA3Q99758 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC24.53■■□□□ 1.52
ABCA3Q99758 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC24.53■■□□□ 1.52
ABCA3Q99758 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC24.53■■□□□ 1.52
ABCA3Q99758 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ABCA3Q99758 AC141586.3-201ENST00000562166 1838 ntBASIC24.53■■□□□ 1.52
ABCA3Q99758 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC24.53■■□□□ 1.52
ABCA3Q99758 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ABCA3Q99758 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ABCA3Q99758 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC24.52■■□□□ 1.52
ABCA3Q99758 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ABCA3Q99758 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
ABCA3Q99758 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC24.52■■□□□ 1.52
ABCA3Q99758 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC24.52■■□□□ 1.52
ABCA3Q99758 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
ABCA3Q99758 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC24.52■■□□□ 1.52
ABCA3Q99758 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
ABCA3Q99758 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ABCA3Q99758 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ABCA3Q99758 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ABCA3Q99758 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.52■■□□□ 1.52
ABCA3Q99758 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
ABCA3Q99758 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ABCA3Q99758 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.52■■□□□ 1.52
ABCA3Q99758 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
ABCA3Q99758 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ABCA3Q99758 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
ABCA3Q99758 LAGE3P1-201ENST00000425356 484 ntBASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms