Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYNGAP1Q96PV0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SYNGAP1Q96PV0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 AC233702.3-201ENST00000578656 1387 ntBASIC21■□□□□ 0.95
SYNGAP1Q96PV0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 AL160237.2-201ENST00000556165 472 ntBASIC21■□□□□ 0.95
SYNGAP1Q96PV0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SYNGAP1Q96PV0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 AC018445.3-201ENST00000624177 1945 ntBASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 AC074051.2-201ENST00000565115 352 ntBASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 Z69720.1-201ENST00000601483 472 ntBASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.99■□□□□ 0.95
SYNGAP1Q96PV0 BX323043.1-201ENST00000641006 1765 ntBASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 AC087289.5-201ENST00000586076 3175 ntBASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 AC079781.3-201ENST00000449110 356 ntBASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 AC009065.1-201ENST00000564055 1225 ntBASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 AC024563.2-201ENST00000603282 481 ntBASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 AC068587.9-201ENST00000641814 219 ntBASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SYNGAP1Q96PV0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 KRT89P-201ENST00000620027 1478 ntBASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 AP000347.1-202ENST00000435868 847 ntBASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 AL592071.1-201ENST00000611956 408 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms