Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC025062.2-201ENST00000605477 670 ntBASIC18.11■□□□□ 0.49
CFAP54Q96N23 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP54Q96N23 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CFAP54Q96N23 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.11■□□□□ 0.49
CFAP54Q96N23 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.11■□□□□ 0.49
CFAP54Q96N23 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.1■□□□□ 0.49
CFAP54Q96N23 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CFAP54Q96N23 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP54Q96N23 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.1■□□□□ 0.49
CFAP54Q96N23 GUSBP12-201ENST00000513727 720 ntBASIC18.1■□□□□ 0.49
CFAP54Q96N23 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
CFAP54Q96N23 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP54Q96N23 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP54Q96N23 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP54Q96N23 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP54Q96N23 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP54Q96N23 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.1■□□□□ 0.49
CFAP54Q96N23 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.1■□□□□ 0.49
CFAP54Q96N23 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.1■□□□□ 0.49
CFAP54Q96N23 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.1■□□□□ 0.49
CFAP54Q96N23 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP54Q96N23 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CFAP54Q96N23 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP54Q96N23 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.09■□□□□ 0.49
CFAP54Q96N23 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.09■□□□□ 0.49
CFAP54Q96N23 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP54Q96N23 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.09■□□□□ 0.49
CFAP54Q96N23 MTDHP3-201ENST00000594186 672 ntBASIC18.09■□□□□ 0.49
CFAP54Q96N23 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.09■□□□□ 0.49
CFAP54Q96N23 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP54Q96N23 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP54Q96N23 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.09■□□□□ 0.49
CFAP54Q96N23 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP54Q96N23 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CFAP54Q96N23 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP54Q96N23 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP54Q96N23 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP54Q96N23 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.09■□□□□ 0.49
CFAP54Q96N23 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.09■□□□□ 0.49
CFAP54Q96N23 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP54Q96N23 AC002310.6-201ENST00000624451 1377 ntBASIC18.09■□□□□ 0.49
CFAP54Q96N23 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.09■□□□□ 0.49
CFAP54Q96N23 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP54Q96N23 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CFAP54Q96N23 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.09■□□□□ 0.49
CFAP54Q96N23 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP54Q96N23 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
CFAP54Q96N23 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.09■□□□□ 0.49
CFAP54Q96N23 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP54Q96N23 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CFAP54Q96N23 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CFAP54Q96N23 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
CFAP54Q96N23 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.08■□□□□ 0.49
CFAP54Q96N23 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.08■□□□□ 0.49
CFAP54Q96N23 MIR3180-5-201ENST00000583743 153 ntBASIC18.08■□□□□ 0.49
CFAP54Q96N23 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CFAP54Q96N23 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CFAP54Q96N23 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP54Q96N23 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP54Q96N23 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CFAP54Q96N23 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.08■□□□□ 0.48
CFAP54Q96N23 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.08■□□□□ 0.48
CFAP54Q96N23 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.08■□□□□ 0.48
CFAP54Q96N23 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.08■□□□□ 0.48
CFAP54Q96N23 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.08■□□□□ 0.48
CFAP54Q96N23 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP54Q96N23 ELL2P1-201ENST00000413990 1906 ntBASIC18.08■□□□□ 0.48
CFAP54Q96N23 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP54Q96N23 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP54Q96N23 HEIH-201ENST00000623091 1652 ntBASIC18.08■□□□□ 0.48
CFAP54Q96N23 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.08■□□□□ 0.48
CFAP54Q96N23 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.08■□□□□ 0.48
CFAP54Q96N23 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP54Q96N23 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP54Q96N23 AL023284.2-201ENST00000405850 579 ntBASIC18.07■□□□□ 0.48
CFAP54Q96N23 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.07■□□□□ 0.48
CFAP54Q96N23 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CFAP54Q96N23 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CFAP54Q96N23 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.07■□□□□ 0.48
CFAP54Q96N23 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP54Q96N23 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.07■□□□□ 0.48
CFAP54Q96N23 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.07■□□□□ 0.48
CFAP54Q96N23 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP54Q96N23 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP54Q96N23 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP54Q96N23 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP54Q96N23 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.07■□□□□ 0.48
CFAP54Q96N23 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.07■□□□□ 0.48
CFAP54Q96N23 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.07■□□□□ 0.48
CFAP54Q96N23 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.07■□□□□ 0.48
CFAP54Q96N23 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP54Q96N23 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP54Q96N23 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.07■□□□□ 0.48
CFAP54Q96N23 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CFAP54Q96N23 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP54Q96N23 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP54Q96N23 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CFAP54Q96N23 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP54Q96N23 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.07■□□□□ 0.48
CFAP54Q96N23 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms