Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPG11Q96JI7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPG11Q96JI7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPG11Q96JI7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPG11Q96JI7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPG11Q96JI7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPG11Q96JI7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPG11Q96JI7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SPG11Q96JI7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SPG11Q96JI7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.67■□□□□ 0.1
SPG11Q96JI7 RBM17P3-201ENST00000417687 1192 ntBASIC15.67■□□□□ 0.1
SPG11Q96JI7 UPF3AP3-201ENST00000420996 769 ntBASIC15.67■□□□□ 0.1
SPG11Q96JI7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.67■□□□□ 0.1
SPG11Q96JI7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.67■□□□□ 0.1
SPG11Q96JI7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.67■□□□□ 0.1
SPG11Q96JI7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.67■□□□□ 0.1
SPG11Q96JI7 FAM215A-202ENST00000632077 792 ntBASIC15.67■□□□□ 0.1
SPG11Q96JI7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SPG11Q96JI7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPG11Q96JI7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPG11Q96JI7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.67■□□□□ 0.1
SPG11Q96JI7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SPG11Q96JI7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPG11Q96JI7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.66■□□□□ 0.1
SPG11Q96JI7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPG11Q96JI7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPG11Q96JI7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SPG11Q96JI7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPG11Q96JI7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.66■□□□□ 0.1
SPG11Q96JI7 RPS8P6-201ENST00000426177 609 ntBASIC15.66■□□□□ 0.1
SPG11Q96JI7 RNA5SP415-201ENST00000517246 115 ntBASIC15.66■□□□□ 0.1
SPG11Q96JI7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.66■□□□□ 0.1
SPG11Q96JI7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.66■□□□□ 0.1
SPG11Q96JI7 AC008608.2-201ENST00000606089 416 ntBASIC15.66■□□□□ 0.1
SPG11Q96JI7 AC116407.3-201ENST00000623905 1129 ntBASIC15.66■□□□□ 0.1
SPG11Q96JI7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.66■□□□□ 0.1
SPG11Q96JI7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPG11Q96JI7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPG11Q96JI7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.66■□□□□ 0.1
SPG11Q96JI7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPG11Q96JI7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPG11Q96JI7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPG11Q96JI7 ZNF259P1-201ENST00000407656 1365 ntBASIC15.66■□□□□ 0.1
SPG11Q96JI7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPG11Q96JI7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SPG11Q96JI7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPG11Q96JI7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.66■□□□□ 0.1
SPG11Q96JI7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.66■□□□□ 0.1
SPG11Q96JI7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPG11Q96JI7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.66■□□□□ 0.1
SPG11Q96JI7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SPG11Q96JI7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.66■□□□□ 0.1
SPG11Q96JI7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPG11Q96JI7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.66■□□□□ 0.1
SPG11Q96JI7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPG11Q96JI7 HLA-J-201ENST00000462773 1622 ntBASIC15.66■□□□□ 0.1
SPG11Q96JI7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.65■□□□□ 0.1
SPG11Q96JI7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPG11Q96JI7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPG11Q96JI7 MED15P5-201ENST00000423150 992 ntBASIC15.65■□□□□ 0.1
SPG11Q96JI7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 HLA-J-203ENST00000494367 1087 ntBASIC15.65■□□□□ 0.1
SPG11Q96JI7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPG11Q96JI7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPG11Q96JI7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPG11Q96JI7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPG11Q96JI7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPG11Q96JI7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPG11Q96JI7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPG11Q96JI7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 KRT18P3-201ENST00000451602 1288 ntBASIC15.65■□□□□ 0.1
SPG11Q96JI7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPG11Q96JI7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 MIR3197-201ENST00000582241 73 ntBASIC15.65■□□□□ 0.1
SPG11Q96JI7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPG11Q96JI7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPG11Q96JI7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPG11Q96JI7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SPG11Q96JI7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SPG11Q96JI7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
SPG11Q96JI7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.64■□□□□ 0.09
SPG11Q96JI7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPG11Q96JI7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPG11Q96JI7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPG11Q96JI7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms