Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
TMEM54Q969K7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM54Q969K7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM54Q969K7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM54Q969K7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM54Q969K7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM54Q969K7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM54Q969K7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM54Q969K7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM54Q969K7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM54Q969K7 SDHAP2-201ENST00000455183 2001 ntBASIC16.3■□□□□ 0.2
TMEM54Q969K7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM54Q969K7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM54Q969K7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM54Q969K7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM54Q969K7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM54Q969K7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM54Q969K7 AC113347.1-201ENST00000413321 391 ntBASIC16.3■□□□□ 0.2
TMEM54Q969K7 LIN28AP1-201ENST00000429574 405 ntBASIC16.3■□□□□ 0.2
TMEM54Q969K7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM54Q969K7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.3■□□□□ 0.2
TMEM54Q969K7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.3■□□□□ 0.2
TMEM54Q969K7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM54Q969K7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
TMEM54Q969K7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TMEM54Q969K7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM54Q969K7 AC135050.7-201ENST00000624508 2218 ntBASIC16.3■□□□□ 0.2
TMEM54Q969K7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM54Q969K7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM54Q969K7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM54Q969K7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TMEM54Q969K7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TMEM54Q969K7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM54Q969K7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM54Q969K7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM54Q969K7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TMEM54Q969K7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM54Q969K7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TMEM54Q969K7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM54Q969K7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM54Q969K7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
TMEM54Q969K7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM54Q969K7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM54Q969K7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM54Q969K7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM54Q969K7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TMEM54Q969K7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM54Q969K7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TMEM54Q969K7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.29■□□□□ 0.2
TMEM54Q969K7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM54Q969K7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM54Q969K7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM54Q969K7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM54Q969K7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM54Q969K7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM54Q969K7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TMEM54Q969K7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM54Q969K7 NEFHP1-201ENST00000412845 2629 ntBASIC16.29■□□□□ 0.2
TMEM54Q969K7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM54Q969K7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM54Q969K7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.29■□□□□ 0.2
TMEM54Q969K7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 TERF1P1-201ENST00000311003 1181 ntBASIC16.28■□□□□ 0.2
TMEM54Q969K7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 AL137013.1-201ENST00000432946 1228 ntBASIC16.28■□□□□ 0.2
TMEM54Q969K7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 ATP5G1P1-201ENST00000448724 379 ntBASIC16.28■□□□□ 0.2
TMEM54Q969K7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 LINC01023-201ENST00000606054 436 ntBASIC16.28■□□□□ 0.2
TMEM54Q969K7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM54Q969K7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM54Q969K7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms